RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NDST1P52848 882 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 EIF3EP60228 445 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 E2F5Q15329 346 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 C9orf57Q5W0N0 161 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC26A9Q7LBE3 791 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 LINC01465Q8N7H1 131 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 MTBPQ96DY7 904 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 SELENOSQ9BQE4 189 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 MTIF3Q9H2K0 278 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 NGRNQ9NPE2 291 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 AMACRQ9UHK6 382 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TRHDEQ9UKU6 1024 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ADGRA3Q8IWK6 1321 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HAS3O00219 553 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF623O75123 536 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 PAMP19021 973 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 CDH6P55285 790 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 DNAJC3Q13217 504 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 DUPD1Q68J44 220 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 LINC00523Q86TU6 105 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 PYROXD1Q8WU10 500 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 KCTD13Q8WZ19 329 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 MCRS1Q96EZ8 462 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 PNKPQ96T60 521 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 SEC31AO94979 1220 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 VNN1O95497 513 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 CPP00450 1065 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TROVE2P10155 538 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 RFC2P35250 354 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 KIZQ2M2Z5 673 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HHATQ5VTY9 493 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 PASD1Q8IV76 773 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 SCML4Q8N228 414 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 CASKIN2Q8WXE0 1202 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 CABS1Q96KC9 395 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HNRNPABQ99729 332 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 O00370 1275 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 TTI1O43156 1089 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 INHBAP08476 426 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ETFBP38117 255 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 MSH2P43246 934 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZNF33AQ06730 810 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DMTNQ08495 405 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DBN1Q16643 649 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 HIF1AQ16665 826 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 LMBRD2Q68DH5 695 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 OR5B17Q8NGF7 314 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DNAJB3Q8WWF6 145 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 CYTH2Q99418 400 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 POP1Q99575 1024 aaKnown RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 TRIM31Q9BZY9 425 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 TSPAN16Q9UKR8 245 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SYN3O14994 580 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ATP5HO75947 161 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ARIH2O95376 493 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 TTC4O95801 387 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 RASA2Q15283 850 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 C1orf220Q5T0J3 134 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 EEF1DP3Q658K8 133 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 CCDC13Q8IYE1 715 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SNX24Q9Y343 169 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 CDY2AQ9Y6F7 541 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SOCS7O14512 581 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 OXCT1P55809 520 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 GNGT1P63211 74 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DGKZQ13574 1117 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZNF280DQ6N043 979 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 PDZD8Q8NEN9 1154 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DDX1Q92499 740 aaKnown RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 SEC14L1Q92503 715 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 OSMRQ99650 979 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ARID3AQ99856 593 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 RNPEPQ9H4A4 650 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 DMAP1Q9NPF5 467 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 PFDN4Q9NQP4 134 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 INTS9Q9NV88 658 aaKnown RBP10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 ADAM21Q9UKJ8 722 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 USP18Q9UMW8 372 aa10.58□□□□□ -0.72
TRAPPC8-211ENST00000582539 FAN1Q9Y2M0 1017 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms