RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 R3HDM2Q9Y2K5 976 aaKnown RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 hCG_1818297A0A087WSY0 165 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 PI4K2BG5E9Z4 385 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 NDC80O14777 642 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 PPEF2O14830 753 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 LRCH4O75427 683 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 SLC25A11Q02978 314 aaKnown RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 KAZNQ674X7 775 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 ARHGAP17Q68EM7 881 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 HOOK3Q86VS8 718 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 KLHL11Q9NVR0 708 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 ARVCFO00192 962 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 NUDT17P0C025 328 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 GPD1P21695 349 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 ZNF844Q08AG5 666 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 ATP13A4Q4VNC1 1196 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 AGBL2Q5U5Z8 902 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 OR6B2Q6IFH4 312 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 CEP128Q6ZU80 1094 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 ACOT1Q86TX2 421 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 FAM228AQ86W67 206 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 ZDHHC17Q8IUH5 632 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 NCAPGQ9BPX3 1015 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 TRAIPQ9BWF2 469 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 CXCL16Q9H2A7 254 aa23.8■■□□□ 1.4
CCDC47-204ENST00000582252 TRMT13Q9NUP7 481 aaKnown RBP23.8■■□□□ 1.4
CCDC47-204ENST00000582252 A8MXQ7 604 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 KPNA7A9QM74 516 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 RARGP13631 454 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 TCF4P15884 667 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 PCK1P35558 622 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 CDKN2BP42772 138 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 ZNF143P52747 638 aaPredicted RBP23.79■■□□□ 1.4
CCDC47-204ENST00000582252 PPP1R26Q5T8A7 1209 aaPredicted RBP23.79■■□□□ 1.4
CCDC47-204ENST00000582252 GSTA5Q7RTV2 222 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 TTC13Q8NBP0 860 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 STK32AQ8WU08 396 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 CNPY3Q9BT09 278 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 CRISPLD2Q9H0B8 497 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 SNX25Q9H3E2 840 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 KLK14Q9P0G3 267 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 CDY2AQ9Y6F7 541 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 LIASO43766 372 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 ADCY8P40145 1251 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 SKOR1P84550 965 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 SOWAHAQ2M3V2 549 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 ARFGAP2Q8N6H7 521 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 APPL2Q8NEU8 664 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 WNT8BQ93098 351 aa23.79■■□□□ 1.4
CCDC47-204ENST00000582252 DRG1Q9Y295 367 aaKnown RBP23.79■■□□□ 1.4
CCDC47-204ENST00000582252 E5RJQ4 531 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 CAND2O75155 1236 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 KRT10P13645 584 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 BYSLQ13895 437 aaKnown RBP23.78■■□□□ 1.4
CCDC47-204ENST00000582252 PKDCCQ504Y2 493 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 FAM183BPQ6ZVS7 135 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 TRMT10CQ7L0Y3 403 aaKnown RBP23.78■■□□□ 1.4
CCDC47-204ENST00000582252 EMC1Q8N766 993 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 C12orf29Q8N999 325 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 SMG8Q8ND04 991 aaKnown RBP23.78■■□□□ 1.4
CCDC47-204ENST00000582252 RAPGEF5Q92565 580 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 ZWILCHQ9H900 591 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 CHST12Q9NRB3 414 aa23.78■■□□□ 1.4
CCDC47-204ENST00000582252 HUS1O60921 280 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 RPS6KA5O75582 802 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 PFKMP08237 780 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 FAM163BP0C2L3 166 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 GNL1P36915 607 aaPredicted RBP23.77■■□□□ 1.4
CCDC47-204ENST00000582252 THPOP40225 353 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 KDM7AQ6ZMT4 941 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 CRYBG2Q8N1P7 616 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 SLC4A5Q9BY07 1137 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 SENP6Q9GZR1 1112 aaPredicted RBP23.77■■□□□ 1.4
CCDC47-204ENST00000582252 CYLDQ9NQC7 956 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 SLC38A7Q9NVC3 462 aa23.77■■□□□ 1.4
CCDC47-204ENST00000582252 NR1D1P20393 614 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 LRPAP1P30533 357 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 ACTN2P35609 894 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 BCAT1P54687 386 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 KCTD19Q17RG1 926 aaPredicted RBP23.76■■□□□ 1.39
CCDC47-204ENST00000582252 KCTD16Q68DU8 428 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 ANKS1BQ7Z6G8 1248 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 TNIP3Q96KP6 325 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 CAPS2Q9BXY5 557 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 FOXP3Q9BZS1 431 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 CENPHQ9H3R5 247 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 ANAPC5Q9UJX4 755 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 USP18Q9UMW8 372 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 ZNF148Q9UQR1 794 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 NEU2Q9Y3R4 380 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 C2CD4BA6NLJ0 364 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 DPYSL4O14531 572 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 SHOX2O60902 331 aaPredicted RBP23.76■■□□□ 1.39
CCDC47-204ENST00000582252 CTSHP09668 335 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 KDELR1P24390 212 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 MGAT3Q09327 533 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 BST2Q10589 180 aaKnown RBP23.76■■□□□ 1.39
CCDC47-204ENST00000582252 KRT71Q3SY84 523 aa23.76■■□□□ 1.39
CCDC47-204ENST00000582252 EMC10Q5UCC4 262 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms