RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ANKRD52Q8NB46 1076 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 STK32AQ8WU08 396 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 RNF25Q96BH1 459 aaPredicted RBP15.39■□□□□ 0.05
MKS1-211ENST00000581761 RBM41Q96IZ5 413 aaKnown RBP15.39■□□□□ 0.05
MKS1-211ENST00000581761 SEZ6LQ9BYH1 1024 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 TMEM39AQ9NV64 488 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 KLHL11Q9NVR0 708 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 DDX56Q9NY93 547 aaKnown RBP15.39■□□□□ 0.05
MKS1-211ENST00000581761 FAM53CQ9NYF3 392 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 NFU1Q9UMS0 254 aa15.39■□□□□ 0.05
MKS1-211ENST00000581761 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 GPD1P21695 349 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 IGFBP6P24592 240 aaPredicted RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 ACAT1P24752 427 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 COILP38432 576 aaPredicted RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 CUL1Q13616 776 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 MBTPS1Q14703 1052 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 HADHQ16836 314 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 ODF2Q5BJF6 829 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 EMBQ6PCB8 327 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 TMEM86AQ8N2M4 240 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 SLC2A14Q8TDB8 520 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 SLC35F5Q8WV83 523 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 GDAP1L1Q96MZ0 367 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 TRIM51Q9BSJ1 452 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 MED10Q9BTT4 135 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 OSBPL8Q9BZF1 889 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 UBE2OQ9C0C9 1292 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 RGS18Q9NS28 235 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
MKS1-211ENST00000581761 UTP11Q9Y3A2 253 aaKnown RBP15.38■□□□□ 0.05
MKS1-211ENST00000581761 PI4K2BG5E9Z4 385 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 GABRDO14764 452 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 RALAP11233 206 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 SELPP16109 830 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 TKTP29401 623 aaKnown RBP15.37■□□□□ 0.05
MKS1-211ENST00000581761 PTGIRP43119 386 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 PLA2G4AP47712 749 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 LHX1P48742 406 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 FNTAP49354 379 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 SLC6A3Q01959 620 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 NNTQ13423 1086 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 TUSC3Q13454 348 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 BFSP2Q13515 415 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 HLTFQ14527 1009 aaKnown RBP eCLIP15.37■□□□□ 0.05
MKS1-211ENST00000581761 UPP1Q16831 310 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 ATP13A4Q4VNC1 1196 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 TTC27Q6P3X3 843 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 CCDC137Q6PK04 289 aaKnown RBP15.37■□□□□ 0.05
MKS1-211ENST00000581761 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 TMEM110Q86TL2 294 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 JAMLQ86YT9 394 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 C3orf58Q8NDZ4 430 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 C1orf54Q8WWF1 131 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 RXFP2Q8WXD0 754 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 BADQ92934 168 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 UROC1Q96N76 676 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 SLITRK1Q96PX8 696 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 HNRNPABQ99729 332 aaKnown RBP15.37■□□□□ 0.05
MKS1-211ENST00000581761 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
MKS1-211ENST00000581761 SYT15Q9BQS2 421 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 HERPUD2Q9BSE4 406 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 HEMGNQ9BXL5 484 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 DPH5Q9H2P9 285 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 ZWILCHQ9H900 591 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 DDX43Q9NXZ2 648 aaKnown RBP15.37■□□□□ 0.05
MKS1-211ENST00000581761 PCYOX1Q9UHG3 505 aa15.37■□□□□ 0.05
MKS1-211ENST00000581761 C9IYK1 514 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 PAPSS1O43252 624 aaPredicted RBP15.36■□□□□ 0.05
MKS1-211ENST00000581761 DAPK3O43293 454 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 ATP2C2O75185 946 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 LRCH4O75427 683 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 GRAP2O75791 330 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 RNF8O76064 485 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 KRT7P08729 469 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 ODC1P11926 461 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 LCP1P13796 627 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 PDGFRAP16234 1089 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 ACADSBP45954 432 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
MKS1-211ENST00000581761 COPS2P61201 443 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 SLC25A11Q02978 314 aaKnown RBP15.36■□□□□ 0.05
MKS1-211ENST00000581761 ACAP1Q15027 740 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 TRADDQ15628 312 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 MDH1BQ5I0G3 518 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 OLFML1Q6UWY5 402 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 MFSD7Q6UXD7 560 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 POLNQ7Z5Q5 900 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 RTN4RL1Q86UN2 441 aaPredicted RBP15.36■□□□□ 0.05
MKS1-211ENST00000581761 METTL23Q86XA0 190 aa15.36■□□□□ 0.05
MKS1-211ENST00000581761 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.05
MKS1-211ENST00000581761 ZDHHC17Q8IUH5 632 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms