RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ARID3AQ99856 593 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
SNORD55-201ENST00000581525 DNAI2Q9GZS0 605 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
SNORD55-201ENST00000581525 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 LRRC10BA6NIK2 292 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ARNTLO00327 626 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 OLFM2O95897 454 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 CCDC130P13994 396 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 NPR3P17342 541 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 PSMC3P17980 439 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ANXA13P27216 316 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 STARD6P59095 220 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 CYP4F8P98187 520 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 PPP1R26Q5T8A7 1209 aaPredicted RBP13.39□□□□□ -0.27
SNORD55-201ENST00000581525 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 FAM114A1Q8IWE2 563 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 FBXL6Q8N531 539 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF276Q8N554 614 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 MRPS31Q92665 395 aaKnown RBP13.39□□□□□ -0.27
SNORD55-201ENST00000581525 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ANO10Q9NW15 660 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SNORD55-201ENST00000581525 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF840PA6NDX5 716 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 FAM86C2PA6NEL3 165 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 SHISA7A6NL88 538 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 HEPACAM2A8MVW5 462 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 CHADO15335 359 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 AP1G2O75843 785 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 PAEPP09466 180 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 CD58P19256 250 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 VIPR2P41587 438 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 CLCN5P51795 746 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 ZNF132P52740 706 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 PFKPQ01813 784 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 ORC1Q13415 861 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 PKDCCQ504Y2 493 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 CELF5Q8N6W0 485 aaKnown RBP13.38□□□□□ -0.27
SNORD55-201ENST00000581525 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 KREMEN1Q96MU8 473 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 GCNAQ96QF7 691 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 TRMT61BQ9BVS5 477 aaKnown RBP13.38□□□□□ -0.27
SNORD55-201ENST00000581525 INTS2Q9H0H0 1204 aaKnown RBP13.38□□□□□ -0.27
SNORD55-201ENST00000581525 NDST4Q9H3R1 872 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
SNORD55-201ENST00000581525 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
SNORD55-201ENST00000581525 MAGED2Q9UNF1 606 aaPredicted RBP13.38□□□□□ -0.27
SNORD55-201ENST00000581525 DENND4CQ5VZ89 1909 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 RNF225M0QZC1 329 aaPredicted RBP13.37□□□□□ -0.27
SNORD55-201ENST00000581525 FAM200BP0CF97 657 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 VDRP11473 427 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 GLULP15104 373 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
SNORD55-201ENST00000581525 PON1P27169 355 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 YWHAQP27348 245 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 KIF11P52732 1056 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 NUBP1P53384 320 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 SLC5A3P53794 718 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 SLC7A9P82251 487 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 PRKCQQ04759 706 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 KLHL40Q2TBA0 621 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 SLC44A4Q53GD3 710 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 GBP6Q6ZN66 633 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 ARHGEF19Q8IW93 802 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 IRF7Q92985 503 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 USP13Q92995 863 aaPredicted RBP13.37□□□□□ -0.27
SNORD55-201ENST00000581525 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
SNORD55-201ENST00000581525 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 MED10Q9BTT4 135 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 KRT82Q9NSB4 513 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 TDP1Q9NUW8 608 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 WDFY4Q6ZS81 3184 aa13.37□□□□□ -0.27
SNORD55-201ENST00000581525 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms