RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GALNT9Q9HCQ5 603 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 SYBUQ9NX95 663 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF212Q9UDV6 495 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 KCNE5Q9UJ90 142 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 LOC102723971A0A1B0GUV8 181 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 H7C4K7 107 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 hCG_1984214I3L0E3 225 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 ORC4O43929 436 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 ATXN1LP0C7T5 689 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PXNP49023 591 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 ANXA11P50995 505 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 MRPS35P82673 323 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 KRT17Q04695 432 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 TRIM14Q14142 442 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 SLC29A2Q14542 456 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 GRAMD1BQ3KR37 738 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PRR16Q569H4 304 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 AKNAD1Q5T1N1 836 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 TMEM108Q6UXF1 575 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 CLNKQ7Z7G1 428 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 GAS2L3Q86XJ1 694 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 MYLK4Q86YV6 388 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 SYTL1Q8IYJ3 562 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 COLGALT2Q8IYK4 626 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 SIMC1Q8NDZ2 872 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF566Q969W8 418 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 TMEM125Q96AQ2 219 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PPP1R9BQ96SB3 815 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 SELENOOQ9BVL4 669 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PPCSQ9HAB8 311 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 SHOC2Q9UQ13 582 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 MAN2B2Q9Y2E5 1009 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 MRPS17Q9Y2R5 130 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 NEU2Q9Y3R4 380 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 COX11Q9Y6N1 276 aa5.62□□□□□ -1.51
SMCHD1-205ENST00000581383 PRAMEF33A0A0G2JMD5 474 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 F5H697 171 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 PRAMEF10O60809 474 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 BTF3P20290 206 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 ITGALP20701 1170 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 EEF1GP26641 437 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 IL1R2P27930 398 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 TECP42680 631 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 CLK3P49761 638 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 NDUFV1P49821 464 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 ITGA8P53708 1063 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 SATB1Q01826 763 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 CYP2A13Q16696 494 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 GEN1Q17RS7 908 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 MPEG1Q2M385 716 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 MGAT5BQ3V5L5 792 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 GGT6Q6P531 493 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 Q6ZNX1 250 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 CATSPERGQ6ZRH7 1159 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 TMPRSS9Q7Z410 1059 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 KCTD20Q7Z5Y7 419 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 CERS3Q8IU89 383 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF384Q8TF68 577 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 R3HDMLQ9H3Y0 253 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 AS3MTQ9HBK9 375 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 XPNPEP3Q9NQH7 507 aa5.61□□□□□ -1.51
SMCHD1-205ENST00000581383 A0A1W2PS29 197 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 MYADML2A6NDP7 307 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 E7ENX8 843 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 AREL1O15033 823 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ADAMTS3O15072 1205 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 PLA2G6O60733 806 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 TCEA3O75764 348 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 A1BGP04217 495 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 MYL4P12829 197 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 GATA3P23771 443 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ACVR2AP27037 513 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 NPTX2P47972 431 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 PTDSS1P48651 473 aaKnown RBP5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 RPS7P62081 194 aaKnown RBP5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 TNFAIP2Q03169 654 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 TAP2Q03519 686 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 GRM1Q13255 1194 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ARHGEF7Q14155 803 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 STARD3Q14849 445 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 NPY5RQ15761 445 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ZIK1Q3SY52 487 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ERAP2Q6P179 960 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 TSHZ1Q6ZSZ6 1077 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 GPR149Q86SP6 731 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 ADGRG5Q8IZF4 528 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 FAM9AQ8IZU1 332 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 VGLL2Q8N8G2 317 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 TMEM41AQ96HV5 264 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 AIFM2Q9BRQ8 373 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 DKK2Q9UBU2 259 aa5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 MAGED2Q9UNF1 606 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-205ENST00000581383 SPATA31A3Q5VYP0 1347 aa5.59□□□□□ -1.51
SMCHD1-205ENST00000581383 A0A087WV62 115 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms