RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TMEM171Q8WVE6 324 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 OSCP1Q8WVF1 389 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 GLG1Q92896 1179 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 GLOD4Q9HC38 313 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 TRMT13Q9NUP7 481 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 ZNF212Q9UDV6 495 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 ST3GAL5Q9UNP4 418 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 CDY1Q9Y6F8 540 aa5.52□□□□□ -1.53
SMCHD1-204ENST00000581226 A1L4Q6 167 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 INMTO95050 263 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 NXPH3O95157 252 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 LMNAP02545 664 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 ERBB2P04626 1255 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 ANXA2P07355 339 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 TPH1P17752 444 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 IL1R2P27930 398 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 STT3AP46977 705 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 ALDH9A1P49189 494 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 CPT1AP50416 773 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 CLCN2P51788 898 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 HTRA4P83105 476 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 NPY5RQ15761 445 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 LONRF1Q17RB8 773 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 PRR16Q569H4 304 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 KLHDC7AQ5VTJ3 777 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 ABRAQ8N0Z2 381 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 ATP11CQ8NB49 1132 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 DNAJB14Q8TBM8 379 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 IQCDQ96DY2 449 aa5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 DHX36Q9H2U1 1008 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 DNMT3BQ9UBC3 853 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-204ENST00000581226 LINC00473A8K010 186 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 MGST3O14880 152 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 KIAA0355O15063 1070 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 THAP12O43422 761 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 SRGAP2O75044 1071 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 PIAS2O75928 621 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 TTLL1O95922 423 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ONECUT2O95948 504 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 FESP07332 822 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ELFN1P0C7U0 828 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 PRKAR1BP31321 381 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 LIPAP38571 399 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ATXN1P54253 815 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 COL10A1Q03692 680 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 CCNIQ14094 377 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 LY6KQ17RY6 165 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 CERCAMQ5T4B2 595 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 FCRL6Q6DN72 434 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ZNF551Q7Z340 670 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 IZUMO1Q8IYV9 350 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 SIMC1Q8NDZ2 872 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 R3HDM4Q96D70 268 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 DUSP26Q9BV47 211 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 TRIM5Q9C035 493 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ARHGEF3Q9NR81 526 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 RGS17Q9UGC6 210 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 ZNHIT2Q9UHR6 403 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 TLK1Q9UKI8 766 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 SNX14Q9Y5W7 946 aa5.5□□□□□ -1.53
SMCHD1-204ENST00000581226 AQP7P3A6NL99 342 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 RRP9O43818 475 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 IL6RP08887 468 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 TSHRP16473 764 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 NDUFB7P17568 137 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 PDE1AP54750 535 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 AK2P54819 239 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 STK3Q13188 491 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 ZNF750Q32MQ0 723 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 PLAG1Q6DJT9 500 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 GRASPQ7Z6J2 395 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 DPP9Q86TI2 863 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 RNF152Q8N8N0 203 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 XAGE5Q8WWM1 108 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 TNIP3Q96KP6 325 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 HAPLN3Q96S86 360 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 C17orf80Q9BSJ5 609 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 SYNPO2LQ9H987 977 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 ALG13Q9NP73 1137 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 STARD7Q9NQZ5 370 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 SERTAD4Q9NUC0 356 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 SLC17A6Q9P2U8 582 aa5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 CCNL1Q9UK58 526 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-204ENST00000581226 APOL1O14791 398 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 A1BGP04217 495 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 EBLN1P0CF75 366 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 BMP5P22003 454 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 ALDH5A1P51649 535 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 CACNA2D1P54289 1103 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 BCAT1P54687 386 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 FAM153CQ494X1 144 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 AKNAD1Q5T1N1 836 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 TSTD2Q5T7W7 516 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 SLC9A4Q6AI14 798 aa5.48□□□□□ -1.53
SMCHD1-204ENST00000581226 CAND1Q86VP6 1230 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms