RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NHEJ1Q9H9Q4 299 aaPredicted RBP15.09■□□□□ 0.01
SKA2-205ENST00000580541 LRRC4Q9HBW1 653 aa15.09■□□□□ 0.01
SKA2-205ENST00000580541 MAN1C1Q9NR34 630 aa15.09■□□□□ 0.01
SKA2-205ENST00000580541 F8VP50 259 aa15.08■□□□□ 0
SKA2-205ENST00000580541 ZMYND10O75800 440 aa15.08■□□□□ 0
SKA2-205ENST00000580541 SEC24AO95486 1093 aa15.08■□□□□ 0
SKA2-205ENST00000580541 FGF19O95750 216 aa15.08■□□□□ 0
SKA2-205ENST00000580541 SPATA31D3P0C874 917 aa15.08■□□□□ 0
SKA2-205ENST00000580541 CDH5P33151 784 aaPredicted RBP15.08■□□□□ 0
SKA2-205ENST00000580541 NSFP46459 744 aaKnown RBP15.08■□□□□ 0
SKA2-205ENST00000580541 FMO1Q01740 532 aa15.08■□□□□ 0
SKA2-205ENST00000580541 PDE4CQ08493 712 aa15.08■□□□□ 0
SKA2-205ENST00000580541 PKDCCQ504Y2 493 aa15.08■□□□□ 0
SKA2-205ENST00000580541 C10orf76Q5T2E6 689 aa15.08■□□□□ 0
SKA2-205ENST00000580541 HGSNATQ68CP4 663 aa15.08■□□□□ 0
SKA2-205ENST00000580541 WDR59Q6PJI9 974 aa15.08■□□□□ 0
SKA2-205ENST00000580541 CLEC20AQ6ZU45 233 aa15.08■□□□□ 0
SKA2-205ENST00000580541 SPATA31D4Q6ZUB0 917 aa15.08■□□□□ 0
SKA2-205ENST00000580541 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
SKA2-205ENST00000580541 ERICH1Q86X53 443 aa15.08■□□□□ 0
SKA2-205ENST00000580541 TXLNBQ8N3L3 684 aa15.08■□□□□ 0
SKA2-205ENST00000580541 SLC7A14Q8TBB6 771 aa15.08■□□□□ 0
SKA2-205ENST00000580541 IPO4Q8TEX9 1081 aaKnown RBP15.08■□□□□ 0
SKA2-205ENST00000580541 KCTD13Q8WZ19 329 aa15.08■□□□□ 0
SKA2-205ENST00000580541 SECISBP2LQ93073 1101 aaKnown RBP15.08■□□□□ 0
SKA2-205ENST00000580541 CDX2Q99626 313 aaPredicted RBP15.08■□□□□ 0
SKA2-205ENST00000580541 ZSWIM1Q9BR11 485 aa15.08■□□□□ 0
SKA2-205ENST00000580541 ARHGAP20Q9P2F6 1191 aa15.08■□□□□ 0
SKA2-205ENST00000580541 UXTQ9UBK9 157 aaPredicted RBP15.08■□□□□ 0
SKA2-205ENST00000580541 ADAMTS1Q9UHI8 967 aa15.08■□□□□ 0
SKA2-205ENST00000580541 INSL5Q9Y5Q6 135 aa15.08■□□□□ 0
SKA2-205ENST00000580541 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
SKA2-205ENST00000580541 SART1O43290 800 aaKnown RBP15.07■□□□□ 0
SKA2-205ENST00000580541 RTN2O75298 545 aa15.07■□□□□ 0
SKA2-205ENST00000580541 FBXO21O94952 628 aa15.07■□□□□ 0
SKA2-205ENST00000580541 CYP1A1P04798 512 aaPredicted RBP15.07■□□□□ 0
SKA2-205ENST00000580541 POU2F2P09086 479 aa15.07■□□□□ 0
SKA2-205ENST00000580541 EPCAMP16422 314 aa15.07■□□□□ 0
SKA2-205ENST00000580541 CHRNB2P17787 502 aa15.07■□□□□ 0
SKA2-205ENST00000580541 EIF4A3P38919 411 aaKnown RBP15.07■□□□□ 0
SKA2-205ENST00000580541 PPP3CCP48454 512 aa15.07■□□□□ 0
SKA2-205ENST00000580541 GOLGA8FQ08AF8 430 aa15.07■□□□□ 0
SKA2-205ENST00000580541 GOLGA8DPQ0D2H9 430 aa15.07■□□□□ 0
SKA2-205ENST00000580541 TWF1Q12792 350 aa15.07■□□□□ 0
SKA2-205ENST00000580541 HYAL1Q12794 435 aa15.07■□□□□ 0
SKA2-205ENST00000580541 ADAM15Q13444 863 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SPA17Q15506 151 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SLC18A3Q16572 532 aa15.07■□□□□ 0
SKA2-205ENST00000580541 DDR2Q16832 855 aa15.07■□□□□ 0
SKA2-205ENST00000580541 CLEC16AQ2KHT3 1053 aa15.07■□□□□ 0
SKA2-205ENST00000580541 PABPC1LQ4VXU2 614 aaKnown RBP15.07■□□□□ 0
SKA2-205ENST00000580541 ACAD10Q6JQN1 1059 aa15.07■□□□□ 0
SKA2-205ENST00000580541 LLGL2Q6P1M3 1020 aa15.07■□□□□ 0
SKA2-205ENST00000580541 DENND1BQ6P3S1 775 aa15.07■□□□□ 0
SKA2-205ENST00000580541 DENND5BQ6ZUT9 1274 aa15.07■□□□□ 0
SKA2-205ENST00000580541 PIGZQ86VD9 579 aa15.07■□□□□ 0
SKA2-205ENST00000580541 TTC30AQ86WT1 665 aa15.07■□□□□ 0
SKA2-205ENST00000580541 ZDHHC17Q8IUH5 632 aa15.07■□□□□ 0
SKA2-205ENST00000580541 LRRC8AQ8IWT6 810 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SIX6OS1Q8N1H7 587 aa15.07■□□□□ 0
SKA2-205ENST00000580541 LEMD2Q8NC56 503 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SLC20A1Q8WUM9 679 aa15.07■□□□□ 0
SKA2-205ENST00000580541 TRIM11Q96F44 468 aa15.07■□□□□ 0
SKA2-205ENST00000580541 VCPIP1Q96JH7 1222 aa15.07■□□□□ 0
SKA2-205ENST00000580541 PPP1R13BQ96KQ4 1090 aa15.07■□□□□ 0
SKA2-205ENST00000580541 KCNK16Q96T55 309 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SMOQ99835 787 aa15.07■□□□□ 0
SKA2-205ENST00000580541 SFXN1Q9H9B4 322 aa15.07■□□□□ 0
SKA2-205ENST00000580541 ST7Q9NRC1 585 aa15.07■□□□□ 0
SKA2-205ENST00000580541 STRIP2Q9ULQ0 834 aa15.07■□□□□ 0
SKA2-205ENST00000580541 YIPF1Q9Y548 306 aa15.07■□□□□ 0
SKA2-205ENST00000580541 VNN2O95498 520 aa15.06■□□□□ 0
SKA2-205ENST00000580541 CALCAP01258 141 aa15.06■□□□□ 0
SKA2-205ENST00000580541 CALB1P05937 261 aa15.06■□□□□ 0
SKA2-205ENST00000580541 FOSL2P15408 326 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PTPN2P17706 415 aa15.06■□□□□ 0
SKA2-205ENST00000580541 FECHP22830 423 aa15.06■□□□□ 0
SKA2-205ENST00000580541 YWHAQP27348 245 aa15.06■□□□□ 0
SKA2-205ENST00000580541 ADGRE1Q14246 886 aa15.06■□□□□ 0
SKA2-205ENST00000580541 NAA35Q5VZE5 725 aa15.06■□□□□ 0
SKA2-205ENST00000580541 E4F1Q66K89 784 aaPredicted RBP15.06■□□□□ 0
SKA2-205ENST00000580541 ALKBH5Q6P6C2 394 aaKnown RBP15.06■□□□□ 0
SKA2-205ENST00000580541 TMEM110Q86TL2 294 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PASD1Q8IV76 773 aa15.06■□□□□ 0
SKA2-205ENST00000580541 ARHGAP18Q8N392 663 aa15.06■□□□□ 0
SKA2-205ENST00000580541 CMASQ8NFW8 434 aaPredicted RBP15.06■□□□□ 0
SKA2-205ENST00000580541 SLC30A5Q8TAD4 765 aa15.06■□□□□ 0
SKA2-205ENST00000580541 GOLGA1Q92805 767 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PSMG2Q969U7 264 aa15.06■□□□□ 0
SKA2-205ENST00000580541 C18orf8Q96DM3 657 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PPP1R9BQ96SB3 815 aa15.06■□□□□ 0
SKA2-205ENST00000580541 CHP1Q99653 195 aa15.06■□□□□ 0
SKA2-205ENST00000580541 SYT11Q9BT88 431 aa15.06■□□□□ 0
SKA2-205ENST00000580541 TRIM62Q9BVG3 475 aa15.06■□□□□ 0
SKA2-205ENST00000580541 RHOBTB2Q9BYZ6 727 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PRKD2Q9BZL6 878 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PIDD1Q9HB75 910 aa15.06■□□□□ 0
SKA2-205ENST00000580541 CNGB3Q9NQW8 809 aa15.06■□□□□ 0
SKA2-205ENST00000580541 WDR35Q9P2L0 1181 aa15.06■□□□□ 0
SKA2-205ENST00000580541 PTPRDP23468 1912 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms