RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 KIF2CQ99661 725 aa14.19□□□□□ -0.14
CDK5RAP3-213ENST00000579605 RUSC1Q9BVN2 902 aa14.19□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TOR4AQ9NXH8 423 aa14.19□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SUSD2Q9UGT4 822 aa14.19□□□□□ -0.14
CDK5RAP3-213ENST00000579605 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PI4KAP42356 2102 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TNRC6BQ9UPQ9 1833 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TBC1D3BA6NDS4 549 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TULP1O00294 542 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PIRO00625 290 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZBTB24O43167 697 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NOL4O94818 638 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 EIF2S3P41091 472 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 GRIA2P42262 883 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TNFRSF4P43489 277 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 RPL10AP62906 217 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TSPY1Q01534 308 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 HAUS3Q68CZ6 603 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SCN4BQ8IWT1 228 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NAT16Q8N8M0 369 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MIR1-1HGQ9H1L0 117 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 GAREM1Q9H706 876 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CD93Q9NPY3 652 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TM7SF3Q9NS93 570 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ARHGAP26Q9UNA1 814 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PCDH15Q96QU1 1955 aa14.18□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MYO16Q9Y6X6 1858 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PLK4O00444 970 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CTDNEP1O95476 244 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NFICP08651 508 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 HOXB2P14652 356 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PAX3P23760 479 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MAPK7Q13164 816 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ANKRD1Q15327 319 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 WDR45BQ5MNZ6 344 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 RHBDF2Q6PJF5 856 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZPBP2Q6X784 338 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZNF513Q8N8E2 541 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 LSM14AQ8ND56 463 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TMEM161BQ8NDZ6 487 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TRMT2BQ96GJ1 504 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZNF419Q96HQ0 510 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CDC6Q99741 560 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ARID3AQ99856 593 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SLC6A17Q9H1V8 727 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SMPD4Q9NXE4 827 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 DNM3Q9UQ16 869 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 KIAA1549LQ6ZVL6 1849 aa14.17□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZNF462Q96JM2 2506 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ANO9A1A5B4 782 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CILPO75339 1184 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZNF217O75362 1048 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 OR52Z1P0C646 297 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MAPTP10636 758 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ADH5P11766 374 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 HLA-EP13747 358 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NDUFV2P19404 249 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MUTP22033 750 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ACAT1P24752 427 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TAF6P49848 677 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SMTNP53814 917 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SEMG2Q02383 582 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TMEM132DQ14C87 1099 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 RINT1Q6NUQ1 792 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MYRFLQ96LU7 910 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CLMPQ9H6B4 373 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 LRWD1Q9UFC0 647 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 GTF3C4Q9UKN8 822 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 FNDC3AQ9Y2H6 1198 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SHROOM3Q8TF72 1996 aa14.16□□□□□ -0.14
CDK5RAP3-213ENST00000579605 PTPRDP23468 1912 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CITO14578 2027 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 A0A0A0MRY4 1105 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MEI4A8MW99 385 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 ABL1P00519 1130 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TCF3P15923 654 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 MATKP42679 507 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 LIG4P49917 911 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CCDC142Q17RM4 750 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 DHRS13Q6UX07 377 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 TRMT11Q7Z4G4 463 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 SNX29Q8TEQ0 813 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 FOXJ1Q92949 421 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 HNRNPABQ99729 332 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 NTPCRQ9BSD7 190 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 C17orf75Q9HAS0 396 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 BTBD3Q9Y2F9 522 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 CPQQ9Y646 472 aa14.15□□□□□ -0.14
CDK5RAP3-213ENST00000579605 A0A1B0GTW7 788 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 A0A1W2PQF6 199 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms