RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 HOXA6P31267 233 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 FOXK2Q01167 660 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 SATB1Q01826 763 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 NCOA4Q13772 614 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 MTF1Q14872 753 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 ZNF699Q32M78 642 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 CPA6Q8N4T0 437 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 GPR161Q8N6U8 529 aaKnown RBP12.3□□□□□ -0.44
SSH2-208ENST00000579040 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 PLEKHO2Q8TD55 490 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 EBF3Q9H4W6 596 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 TRPM5Q9NZQ8 1165 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
SSH2-208ENST00000579040 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 NME7Q9Y5B8 376 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 ATP8B3O60423 1300 aa12.3□□□□□ -0.44
SSH2-208ENST00000579040 MYO15AQ9UKN7 3530 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 CACNA1AO00555 2505 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 C2orf78A6NCI8 922 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 F8VP50 259 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 IKBKBO14920 756 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
SSH2-208ENST00000579040 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
SSH2-208ENST00000579040 P4HA1P13674 534 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 ARSAP15289 507 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 HDCP19113 662 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 CNR2P34972 360 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 ID4P47928 161 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 CASP4P49662 377 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 NDUFA8P51970 172 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSH2-208ENST00000579040 NFIL3Q16649 462 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 ZACNQ401N2 412 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 Q6ZS52 159 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 ARL14EPQ8N8R7 260 aaPredicted RBP12.29□□□□□ -0.44
SSH2-208ENST00000579040 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 TAF4BQ92750 862 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 TNIP3Q96KP6 325 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 SLC22A12Q96S37 553 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 CYP2S1Q96SQ9 504 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
SSH2-208ENST00000579040 RAB23Q9ULC3 237 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 TRAF3IP3Q9Y228 551 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
SSH2-208ENST00000579040 MYOFQ9NZM1 2061 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 OTOL1A6NHN0 477 aaPredicted RBP12.28□□□□□ -0.44
SSH2-208ENST00000579040 K7ESF4 209 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ATG13O75143 517 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 RTN3O95197 1032 aaPredicted RBP12.28□□□□□ -0.44
SSH2-208ENST00000579040 VNN1O95497 513 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 IFNAR2P48551 515 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 USP46P62068 366 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ENPEPQ07075 957 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 DPYDQ12882 1025 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 NR1H3Q13133 447 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 SGSM1Q2NKQ1 1148 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 FBXO43Q4G163 708 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 LAIR1Q6GTX8 287 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 FSTL4Q6MZW2 842 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 KRBA2Q6ZNG9 492 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 OVCA2Q8WZ82 227 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 CHFRQ96EP1 664 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 CCDC34Q96HJ3 373 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 B3GNT5Q9BYG0 378 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ZNF518BQ9C0D4 1074 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 SMYD3Q9H7B4 428 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
SSH2-208ENST00000579040 ZNF840PA6NDX5 716 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 CLSTN1O94985 981 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 OLFM2O95897 454 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 DRD1P21728 446 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 GJA4P35212 333 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 SLC7A9P82251 487 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 EML3Q32P44 896 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 SV2AQ7L0J3 742 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 FAM35AQ86V20 835 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 LONP2Q86WA8 852 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
SSH2-208ENST00000579040 DCLK2Q8N568 766 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 SMARCD1Q96GM5 515 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
SSH2-208ENST00000579040 DMAP1Q9NPF5 467 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms