RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 URGCPQ8TCY9 931 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 MAIP1Q8WWC4 291 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 FAM122AQ96E09 287 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 MCRS1Q96EZ8 462 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 PNKPQ96T60 521 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 ARFGAP3Q9NP61 516 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 NME7Q9Y5B8 376 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 GJB6O95452 261 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 LMO2P25791 158 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 MARCKSL1P49006 195 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
SREBF1-218ENST00000578469 RABGGTBP53611 331 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 BCAT1P54687 386 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 SLC8A3P57103 927 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 BST2Q10589 180 aaKnown RBP17.84■□□□□ 0.45
SREBF1-218ENST00000578469 UPP1Q16831 310 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 MAP9Q49MG5 647 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 PKDCCQ504Y2 493 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 WSCD1Q658N2 575 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 OR6B2Q6IFH4 312 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 CC2D1AQ6P1N0 951 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-218ENST00000578469 OSTM1Q86WC4 334 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 CPNE8Q86YQ8 564 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 ZDHHC17Q8IUH5 632 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 KLHL7Q8IXQ5 586 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 CCDC26Q8TAB7 109 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 FNIP1Q8TF40 1166 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 HNRNPLLQ8WVV9 542 aaKnown RBP17.84■□□□□ 0.45
SREBF1-218ENST00000578469 SEPT8Q92599 483 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 AP1M1Q9BXS5 423 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 DPEP3Q9H4B8 488 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 SLITRK6Q9H5Y7 841 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 CYLDQ9NQC7 956 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
SREBF1-218ENST00000578469 GABRDO14764 452 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 PYGMP11217 842 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 ODC1P11926 461 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 DESP17661 470 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 PTPN1P18031 435 aaKnown RBP17.83■□□□□ 0.44
SREBF1-218ENST00000578469 PSMA2P25787 234 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 ADORA2BP29275 332 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 AARSP49588 968 aaKnown RBP eCLIP17.83■□□□□ 0.44
SREBF1-218ENST00000578469 VSNL1P62760 191 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 ACAP1Q15027 740 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 LRRC38Q5VT99 294 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 DCLRE1AQ6PJP8 1040 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-218ENST00000578469 TTC30AQ86WT1 665 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 KATNAL2Q8IYT4 538 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 B3GALNT2Q8NCR0 500 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 SLC35F5Q8WV83 523 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 APBB2Q92870 758 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 SLC4A5Q9BY07 1137 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 METTL5Q9NRN9 209 aaKnown RBP17.83■□□□□ 0.44
SREBF1-218ENST00000578469 DDX43Q9NXZ2 648 aaKnown RBP17.83■□□□□ 0.44
SREBF1-218ENST00000578469 STIM2Q9P246 746 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 DSEQ9UL01 958 aa17.83■□□□□ 0.44
SREBF1-218ENST00000578469 B3GAT3O94766 335 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 PARNO95453 639 aaKnown RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 CCDC130P13994 396 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 RFC1P35251 1148 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 ACADSBP45954 432 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 PDE4CQ08493 712 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 ODF2Q5BJF6 829 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 FAM102AQ5T9C2 384 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 MAATS1Q7Z4T9 603 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 TMEM110Q86TL2 294 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 SLC13A5Q86YT5 568 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 IFT20Q8IY31 132 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 SCLYQ96I15 445 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 RUNDC3BQ96NL0 473 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 HNRNPABQ99729 332 aaKnown RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 ELAC1Q9H777 363 aaKnown RBP17.82■□□□□ 0.44
SREBF1-218ENST00000578469 TMEM161AQ9NX61 479 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
SREBF1-218ENST00000578469 E5RJQ4 531 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 ATP8B1O43520 1251 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 ZRANB2O95218 330 aaKnown RBP eCLIP17.81■□□□□ 0.44
SREBF1-218ENST00000578469 PCSK1P29120 753 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 RGS7P49802 495 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 TAS2R40P59535 323 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 PLEKHG4Q58EX7 1191 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 NOMO2Q5JPE7 1267 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 ZFYVE27Q5T4F4 411 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 RCOR2Q8IZ40 523 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 EXD1Q8NHP7 514 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 JOSD2Q8TAC2 188 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 RBM41Q96IZ5 413 aaKnown RBP17.81■□□□□ 0.44
SREBF1-218ENST00000578469 HSFY1Q96LI6 401 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-218ENST00000578469 MED10Q9BTT4 135 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 ASNSD1Q9NWL6 643 aa17.81■□□□□ 0.44
SREBF1-218ENST00000578469 DDX56Q9NY93 547 aaKnown RBP17.81■□□□□ 0.44
SREBF1-218ENST00000578469 CACNG4Q9UBN1 327 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms