RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TAS1R2Q8TE23 839 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 CYP2S1Q96SQ9 504 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 GKN1Q9NS71 199 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 SPATA6Q9NWH7 488 aaPredicted RBP24.43■■□□□ 1.5
VAPA-205ENST00000578314 GTSE1Q9NYZ3 720 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 COL4A2P08572 1712 aa24.43■■□□□ 1.5
VAPA-205ENST00000578314 TRAV19A0A0A6YYK7 116 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 USP17L7P0C7H9 530 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 SP9P0CG40 484 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 PFKLP17858 780 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 PPP3CCP48454 512 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 KRT39Q6A163 491 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 ANKRD40Q6AI12 368 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 MAMSTRQ6ZN01 415 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 EEF2KMTQ96G04 330 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 SLC22A12Q96S37 553 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 APOBEC3GQ9HC16 384 aaKnown RBP24.42■■□□□ 1.5
VAPA-205ENST00000578314 TRPC7Q9HCX4 862 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 TRPM5Q9NZQ8 1165 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 FBXO4Q9UKT5 387 aa24.42■■□□□ 1.5
VAPA-205ENST00000578314 C2orf78A6NCI8 922 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 SPECC1L-ADORA2AF8WAN1 911 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 EPB41P11171 864 aaKnown RBP24.41■■□□□ 1.5
VAPA-205ENST00000578314 SOX9P48436 509 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 NDST1P52848 882 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 FKBP3Q00688 224 aaKnown RBP24.41■■□□□ 1.5
VAPA-205ENST00000578314 TNK2Q07912 1038 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 ACOT1Q86TX2 421 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 ARL14EPQ8N8R7 260 aaPredicted RBP24.41■■□□□ 1.5
VAPA-205ENST00000578314 RIN3Q8TB24 985 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 TSG101Q99816 390 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 IMPG2Q9BZV3 1241 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 LMAN1LQ9HAT1 526 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 CYP3A43Q9HB55 503 aa24.41■■□□□ 1.5
VAPA-205ENST00000578314 NUP210Q8TEM1 1887 aaPredicted RBP24.41■■□□□ 1.5
VAPA-205ENST00000578314 ATP8B3O60423 1300 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 ZNF840PA6NDX5 716 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 LAMTOR5O43504 91 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 STX10O60499 249 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 KINO60870 393 aaKnown RBP24.4■■□□□ 1.5
VAPA-205ENST00000578314 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
VAPA-205ENST00000578314 CHRNB1P11230 501 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 TCF3P15923 654 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 HDCP19113 662 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 CTHP32929 405 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 PMS1P54277 932 aaKnown RBP24.4■■□□□ 1.5
VAPA-205ENST00000578314 INCA1Q0VD86 236 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 ITPRIPL2Q3MIP1 535 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 ZNF528Q3MIS6 628 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 FAM35AQ86V20 835 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 FUKQ8N0W3 1084 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 NUP93Q8N1F7 819 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 TTC8Q8TAM2 541 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 IER2Q9BTL4 223 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 CHRDQ9H2X0 955 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 WDR87Q6ZQQ6 2873 aa24.4■■□□□ 1.5
VAPA-205ENST00000578314 RIF1Q5UIP0 2472 aaKnown RBP24.39■■□□□ 1.5
VAPA-205ENST00000578314 SLC16A3O15427 465 aaKnown RBP24.39■■□□□ 1.49
VAPA-205ENST00000578314 CKMP06732 381 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 PDE6CP51160 858 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 LRRC63Q05C16 580 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 RUNX3Q13761 415 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 TXNDC11Q6PKC3 985 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 SMARCD1Q96GM5 515 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 FAXDC2Q96IV6 333 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 KCNK16Q96T55 309 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 MED10Q9BTT4 135 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 NIF3L1Q9GZT8 377 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 MMRN2Q9H8L6 949 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 HPS4Q9NQG7 708 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 HMGXB4Q9UGU5 601 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 ARHGAP26Q9UNA1 814 aa24.39■■□□□ 1.49
VAPA-205ENST00000578314 TNFRSF10BO14763 440 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 RTN3O95197 1032 aaPredicted RBP24.38■■□□□ 1.49
VAPA-205ENST00000578314 TAF10Q12962 218 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 MTAPQ13126 283 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 PDGFRLQ15198 375 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 ZNF77Q15935 545 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 CC2D1AQ6P1N0 951 aaPredicted RBP24.38■■□□□ 1.49
VAPA-205ENST00000578314 CCDC150Q8NCX0 1101 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 DHTKD1Q96HY7 919 aaPredicted RBP24.38■■□□□ 1.49
VAPA-205ENST00000578314 SEMA4AQ9H3S1 761 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 DMAP1Q9NPF5 467 aaPredicted RBP24.38■■□□□ 1.49
VAPA-205ENST00000578314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.38■■□□□ 1.491e-10■■■■■ 43.7
VAPA-205ENST00000578314 IL37Q9NZH6 218 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 MAN1B1Q9UKM7 699 aa24.38■■□□□ 1.49
VAPA-205ENST00000578314 CACNA1IQ9P0X4 2223 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 YWHAQP27348 245 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 PPP1R2P41236 205 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 MXI1P50539 228 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 USP4Q13107 963 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 ORC1Q13415 861 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 MTF1Q14872 753 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 TRIM68Q6AZZ1 485 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 FBXL13Q8NEE6 735 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 SLC2A14Q8TDB8 520 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 OVCA2Q8WZ82 227 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 SEMA4DQ92854 862 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 SLITRK1Q96PX8 696 aa24.37■■□□□ 1.49
VAPA-205ENST00000578314 TWNKQ96RR1 684 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms