RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 NOVA1P51513 510 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 CASP5P51878 434 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 WNT7BP56706 349 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 PSMC1P62191 440 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 SLC7A9P82251 487 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 CEBPZQ03701 1054 aaKnown RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 EOGTQ5NDL2 527 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 PMS2CLQ68D20 193 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 ANO7Q6IWH7 933 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 HS2ST1Q7LGA3 356 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 RIN3Q8TB24 985 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 C8orf48Q96LL4 319 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 SLC22A12Q96S37 553 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 TTLL2Q9BWV7 592 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 ZSCAN16Q9H4T2 348 aaPredicted RBP15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 UBE4BO95155 1302 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 DNAH14Q0VDD8 3507 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 RALGAPA1Q6GYQ0 2036 aa15.16■□□□□ 0.02
SMARCD2-205ENST00000577686 ZBTB24O43167 697 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 CLSTN1O94985 981 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 RTN3O95197 1032 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 ABL1P00519 1130 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 PDGFRBP09619 1106 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TNNI1P19237 187 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 SEC13P55735 322 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 LMAN2Q12907 356 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 RESTQ13127 1097 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TRPC3Q13507 836 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 CUL4AQ13619 759 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 C2orf27AQ580R0 203 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 BTBD8Q5XKL5 378 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 PSAPL1Q6NUJ1 521 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 LPCAT2Q7L5N7 544 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TRMT11Q7Z4G4 463 aaKnown RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 RASSF3Q86WH2 238 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TTC30AQ86WT1 665 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 OR6B3Q8NGW1 331 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 CXorf38Q8TB03 319 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 WHAMMQ8TF30 809 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 KBTBD7Q8WVZ9 684 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 CLIC6Q96NY7 704 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 PNKPQ96T60 521 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 SMOC1Q9H4F8 434 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 HSPBP1Q9NZL4 362 aa15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 TPRP12270 2363 aaKnown RBP15.15■□□□□ 0.02
SMARCD2-205ENST00000577686 SPTBN2O15020 2390 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 C4orf47A7E2U8 309 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 MAP3K13O43283 966 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 TACC1O75410 805 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 HOXC13P31276 330 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 DHPSP49366 369 aaPredicted RBP15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 SLC39A14Q15043 492 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 STK38Q15208 465 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 CRY1Q16526 586 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 MDH1BQ5I0G3 518 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 LIMS2Q7Z4I7 341 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 FILIP1Q7Z7B0 1213 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 OVCA2Q8WZ82 227 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 OTUB2Q96DC9 234 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 PCED1BQ96HM7 432 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 NUSAP1Q9BXS6 441 aaKnown RBP15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 TPSD1Q9BZJ3 242 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 CRTAC1Q9NQ79 661 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 RXFP3Q9NSD7 469 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 CPQQ9Y646 472 aa15.14■□□□□ 0.01
SMARCD2-205ENST00000577686 ZNF638Q14966 1978 aaKnown RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 F8VP50 259 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 DCLK1O15075 740 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 ATP2C2O75185 946 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 CYP17A1P05093 508 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 MBL2P11226 248 aaPredicted RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 OPRD1P41143 372 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 GRIA2P42262 883 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 ASIC1P78348 528 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 ZNF252P-AS1Q0IIN9 211 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 SNRNP35Q16560 246 aaKnown RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 NAIF1Q69YI7 327 aaPredicted RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 TRAPPC11Q7Z392 1133 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 PDILTQ8N807 584 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 ZSWIM2Q8NEG5 633 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 OR5B17Q8NGF7 314 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 TCEAL3Q969E4 200 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 SYAP1Q96A49 352 aaPredicted RBP15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 CGRRF1Q99675 332 aa15.13■□□□□ 0.01
SMARCD2-205ENST00000577686 PANK2Q9BZ23 570 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms