RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PDGFRBP09619 1106 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 KRT5P13647 590 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DNAJB1P25685 340 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RPL34P49207 117 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ERVFC1P60507 584 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CDR2Q01850 454 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RAB33AQ14088 237 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PTPN14Q15678 1187 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ASIC2Q16515 512 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CFAP221Q4G0U5 840 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TPGS2Q68CL5 300 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RSPO2Q6UXX9 243 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PAQR9Q6ZVX9 377 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RTL10Q7L3V2 364 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ADGRD2Q7Z7M1 963 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ACOT1Q86TX2 421 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LRRTM3Q86VH5 581 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TMTC1Q8IUR5 882 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DCP1BQ8IZD4 617 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SPC24Q8NBT2 197 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 OR10T2Q8NGX3 314 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TFAP2BQ92481 460 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 FUBP3Q96I24 572 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CEP295NLQ96MC4 621 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HEXIM2Q96MH2 286 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RTKNQ9BST9 563 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF518BQ9C0D4 1074 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CSNK1G1Q9HCP0 422 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PLXNA4Q9HCM2 1894 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SPEGQ15772 3267 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MYBPHLA2RUH7 354 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SOBPA7XYQ1 873 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PI15O43692 258 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PAPLNO95428 1278 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CXCL14O95715 111 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYP1A1P04798 512 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 URODP06132 367 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GZMAP12544 262 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CHRNB2P17787 502 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GNA15P30679 374 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TSPY1Q01534 308 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 KLHL30Q0D2K2 578 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PSMD5Q16401 504 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NFE2Q16621 373 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CTXN3Q4LDR2 81 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF394Q53GI3 561 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SGO2Q562F6 1265 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 KIAA1841Q6NSI8 718 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LILRA6Q6PI73 481 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF571Q7Z3V5 609 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NOP9Q86U38 636 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CEP57Q86XR8 500 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 FUKQ8N0W3 1084 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SUMF1Q8NBK3 374 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF461Q8TAF7 563 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 STK32AQ8WU08 396 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 AGPAT1Q99943 283 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HINFPQ9BQA5 517 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 S1PR5Q9H228 398 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HAUS4Q9H6D7 363 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GTF3C4Q9UKN8 822 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NENFQ9UMX5 172 aa11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ASH1LQ9NR48 2969 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 C2orf71A6NGG8 1288 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PRR5-ARHGAP8B1AHC4 643 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HCRTO43612 131 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ATP2C2O75185 946 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LSM8O95777 96 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 UNGP13051 313 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ATF2P15336 505 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NPR3P17342 541 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 USP8P40818 1118 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GPD2P43304 727 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MAGEA11P43364 429 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PDE6CP51160 858 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ARHGAP8P85298 464 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 FMO1Q01740 532 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 VSTM1Q6UX27 236 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TRIM72Q6ZMU5 477 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms