RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	PSMA7	O14818	248 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MAPK13	O15264	365 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ATG13	O75143	517 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ATP2C2	O75185	946 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	LRRN2	O75325	713 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	AP1G2	O75843	785 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NOL4	O94818	638 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	HLA-DRA	P01903	254 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	LMNA	P02545	664 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	F11	P03951	625 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	C4BPA	P04003	597 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SP9	P0CG40	484 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PFKL	P17858	780 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	TARS	P26639	723 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	YWHAQ	P27348	245 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NBL1	P41271	181 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CXCL12	P48061	93 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GCLM	P48507	274 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MLLT6	P55198	1093 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SLC8A3	P57103	927 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FAM160A1	Q05DH4	1040 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FCHO2	Q0JRZ9	810 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CETN1	Q12798	172 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GRSF1	Q12849	480 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	RUNX3	Q13761	415 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZNF268	Q14587	947 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	EDRF1	Q3B7T1	1238 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	THSD4	Q6ZMP0	1018 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SV2A	Q7L0J3	742 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	TTC39C	Q8N584	583 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	B3GALNT2	Q8NCR0	500 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PDZD8	Q8NEN9	1154 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CXorf38	Q8TB03	319 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	KBTBD7	Q8WVZ9	684 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZNF516	Q92618	1163 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ATP2A3	Q93084	1043 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FBXO32	Q969P5	355 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SMARCD1	Q96GM5	515 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PCED1B	Q96HM7	432 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CHAMP1	Q96JM3	812 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZFYVE19	Q96K21	471 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	C8orf48	Q96LL4	319 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DDX23	Q9BUQ8	820 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SMG9	Q9H0W8	520 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	KCTD10	Q9H3F6	313 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GOLPH3L	Q9H4A5	285 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SMYD3	Q9H7B4	428 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	VRTN	Q9H8Y1	702 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CYP3A43	Q9HB55	503 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	IL21	Q9HBE4	155 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DMAP1	Q9NPF5	467 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CRTAC1	Q9NQ79	661 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DMAC2	Q9NW81	257 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DUS2	Q9NX74	493 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NCDN	Q9UBB6	729 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MTF2	Q9Y483	593 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	VWA8	A3KMH1	1905 aa		5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.76	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DENND4A	Q7Z401	1863 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	C2orf16	Q68DN1	1984 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PRR23A	A6NEV1	266 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	HCRT	O43612	131 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PRAMEF12	O95522	483 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NFATC1	O95644	943 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FGFR1OP	O95684	399 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FAM200B	P0CF97	657 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	TRIM49	P0CI25	452 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	TRIM49C	P0CI26	452 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MBL2	P11226	248 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	HMGA1	P17096	107 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ADORA2B	P29275	332 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GTF2H1	P32780	548 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CTH	P32929	405 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ANP32A	P39687	249 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	RAP1GAP	P47736	663 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	SOX9	P48436	509 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MXI1	P50539	228 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NDST1	P52848	882 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CDH8	P55286	799 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	YWHAE	P62258	255 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NOP14	P78316	857 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	DLG4	P78352	724 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	FKBP3	Q00688	224 aa	Known RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ENPEP	Q07075	957 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GOLGA8F	Q08AF8	430 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	GOLGA8DP	Q0D2H9	430 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PNOC	Q13519	176 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	MTF1	Q14872	753 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	PON2	Q15165	354 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NFIL3	Q16649	462 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZNF528	Q3MIS6	628 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZACN	Q401N2	412 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	CCDC40	Q4G0X9	1142 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	ZNF658	Q5TYW1	1059 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	KRT39	Q6A163	491 aa		5.75	□□□□□ -1.49
ARHGAP28-208	ENST00000577524	NUDT18	Q6ZVK8	323 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms