RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TMEFF1Q8IYR6 380 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 ALLCQ8N6M5 410 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 TXNDC5Q8NBS9 432 aaKnown RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 PKMYT1Q99640 499 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
COPS3-214ENST00000577246 SEL1LQ9UBV2 794 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 SNX9Q9Y5X1 595 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 EML5Q05BV3 1969 aa14.3□□□□□ -0.12
COPS3-214ENST00000577246 MYH11P35749 1972 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 LAMA1P25391 3075 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 SPEGQ15772 3267 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 TISP43B9A030 160 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 H3BQV1 296 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 LEFTY2O00292 366 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 TRIM66O15016 1216 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 ZBTB24O43167 697 aaPredicted RBP14.29□□□□□ -0.12
COPS3-214ENST00000577246 OPHN1O60890 802 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 KAT7O95251 611 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 CYP17A1P05093 508 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 CFIP05156 583 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 KRT19P08727 400 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 PLCG1P19174 1290 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 LONP1P36776 959 aaKnown RBP14.29□□□□□ -0.12
COPS3-214ENST00000577246 GRIA2P42262 883 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 SLC7A9P82251 487 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 RESTQ13127 1097 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 DUOXA1Q1HG43 343 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 PEAR1Q5VY43 1037 aaPredicted RBP14.29□□□□□ -0.12
COPS3-214ENST00000577246 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 SLC36A4Q6YBV0 504 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 DENND5BQ6ZUT9 1274 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 NUDT18Q6ZVK8 323 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 ARMCX6Q7L4S7 300 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 FILIP1Q7Z7B0 1213 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 PIP4P1Q86T03 277 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 BRSK2Q8IWQ3 736 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 PGBD3Q8N328 593 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 CSGALNACT2Q8N6G5 542 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 C1orf127Q8N9H9 656 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 IL17RCQ8NAC3 791 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 HMGB4Q8WW32 186 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 RLN3Q8WXF3 142 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 FAM213AQ9BRX8 229 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 RBAKQ9NYW8 714 aaPredicted RBP14.29□□□□□ -0.12
COPS3-214ENST00000577246 CDH9Q9ULB4 789 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 SLC6A14Q9UN76 642 aa14.29□□□□□ -0.12
COPS3-214ENST00000577246 GABRDO14764 452 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 TMEM191BP0C7N4 346 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 ADSSP30520 456 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 TIE1P35590 1138 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 GRIK1P39086 918 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 PTGER3P43115 390 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 TNFRSF4P43489 277 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 DHCR24Q15392 516 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 FAM171BQ6P995 826 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 ADGRG2Q8IZP9 1017 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 KCNV2Q8TDN2 545 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 LRRC15Q8TF66 581 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 ACCSQ96QU6 501 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 GTPBP2Q9BX10 602 aaKnown RBP14.28□□□□□ -0.12
COPS3-214ENST00000577246 MRPL44Q9H9J2 332 aaKnown RBP14.28□□□□□ -0.12
COPS3-214ENST00000577246 ARHGEF4Q9NR80 690 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 TBC1D14Q9P2M4 693 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 PILRBQ9UKJ0 227 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
COPS3-214ENST00000577246 A0A0A0MRY4 1105 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 SPAARA0A1B0GVQ0 90 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 TCRBV21S2A2A0A5A6 115 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 FAM221BA6H8Z2 402 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 SGK1O00141 431 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 SYPP08247 313 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 SERPINF2P08697 491 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 ADH5P11766 374 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 GARTP22102 1010 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 DDIT3P35638 169 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 RPL6Q02878 288 aaKnown RBP14.27□□□□□ -0.13
COPS3-214ENST00000577246 ALCAMQ13740 583 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 GAB4Q2WGN9 574 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 BTBD8Q5XKL5 378 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 OTUB2Q96DC9 234 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 ANKRD36BP1Q96IX9 119 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 SYT15Q9BQS2 421 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 TTLL2Q9BWV7 592 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 TMEM74BQ9NUR3 256 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 CPQQ9Y646 472 aa14.27□□□□□ -0.13
COPS3-214ENST00000577246 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
COPS3-214ENST00000577246 ZNF840PA6NDX5 716 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 GAP43P17677 238 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 ITPKAP23677 461 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 KIR2DL1P43626 348 aaPredicted RBP14.26□□□□□ -0.13
COPS3-214ENST00000577246 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
COPS3-214ENST00000577246 CYP27A1Q02318 531 aa14.26□□□□□ -0.13
COPS3-214ENST00000577246 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms