RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 NOP14P78316 857 aaKnown RBP16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ENPEPQ07075 957 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 MTAPQ13126 283 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 STIM1Q13586 685 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 RUNX3Q13761 415 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ZNF528Q3MIS6 628 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ASCL5Q7RTU5 278 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ARL14EPQ8N8R7 260 aaPredicted RBP16.49■□□□□ 0.23
SF3B3-215ENST00000577085 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 EXOC4Q96A65 974 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 CYP2S1Q96SQ9 504 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 EBF3Q9H4W6 596 aa16.49■□□□□ 0.23
SF3B3-215ENST00000577085 C2orf78A6NCI8 922 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 RTN3O95197 1032 aaPredicted RBP16.48■□□□□ 0.23
SF3B3-215ENST00000577085 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
SF3B3-215ENST00000577085 LMNAP02545 664 aaKnown RBP16.48■□□□□ 0.23
SF3B3-215ENST00000577085 PRCPP42785 496 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 IFNAR2P48551 515 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 NDST1P52848 882 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 USP46P62068 366 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 MTF1Q14872 753 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 PON2Q15165 354 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 PDGFRLQ15198 375 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 NUP93Q8N1F7 819 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 EEF2KMTQ96G04 330 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 CHRDQ9H2X0 955 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 TMEM8AQ9HCN3 771 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 DMAP1Q9NPF5 467 aaPredicted RBP16.48■□□□□ 0.23
SF3B3-215ENST00000577085 DUS2Q9NX74 493 aaKnown RBP16.48■□□□□ 0.23
SF3B3-215ENST00000577085 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
SF3B3-215ENST00000577085 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 PFKLP17858 780 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 YWHAQP27348 245 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 GTF2H1P32780 548 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 CCR3P51677 355 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 NRLP54845 237 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 TAF10Q12962 218 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 ORC1Q13415 861 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 KRT39Q6A163 491 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 TRIM68Q6AZZ1 485 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 FAM35AQ86V20 835 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 UNC93AQ86WB7 457 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 MAML2Q8IZL2 1156 aaPredicted RBP16.47■□□□□ 0.23
SF3B3-215ENST00000577085 CPA6Q8N4T0 437 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 ATP2A3Q93084 1043 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 SLC22A12Q96S37 553 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 TTLL2Q9BWV7 592 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 SDCBP2Q9H190 292 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 KRT82Q9NSB4 513 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 PCDHA5Q9Y5H7 936 aa16.47■□□□□ 0.23
SF3B3-215ENST00000577085 COL4A2P08572 1712 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 PSMA7O14818 248 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 AP1G2O75843 785 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 CHRNB1P11230 501 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 CD58P19256 250 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ASPAP45381 313 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 MXI1P50539 228 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 CACNA2D1P54289 1103 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 PPP3CAQ08209 521 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 GRSF1Q12849 480 aaKnown RBP eCLIP16.46■□□□□ 0.23
SF3B3-215ENST00000577085 NR1H3Q13133 447 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 FZD5Q13467 585 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 DCAF17Q5H9S7 520 aaPredicted RBP16.46■□□□□ 0.23
SF3B3-215ENST00000577085 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 C1orf220Q5T0J3 134 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 TXNDC11Q6PKC3 985 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 TSSK4Q6SA08 328 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ADSSL1Q8N142 457 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 SH3RF2Q8TEC5 729 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 OSCP1Q8WVF1 389 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
SF3B3-215ENST00000577085 FBXO32Q969P5 355 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 KCNK16Q96T55 309 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 NIF3L1Q9GZT8 377 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 NACA2Q9H009 215 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 CYP3A43Q9HB55 503 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 FAM49BQ9NUQ9 324 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ZSCAN32Q9NX65 697 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ARHGAP26Q9UNA1 814 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 PCDHGA2Q9Y5H1 932 aa16.46■□□□□ 0.23
SF3B3-215ENST00000577085 ZNF840PA6NDX5 716 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 FAM200BP0CF97 657 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 CCDC130P13994 396 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 ARSAP15289 507 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 PPP1R2P41236 205 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 CXCL12P48061 93 aa16.45■□□□□ 0.22
SF3B3-215ENST00000577085 FKBP3Q00688 224 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms