RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 USP46P62068 366 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 TFAMQ00059 246 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 MYL7Q01449 175 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 MCM6Q14566 821 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 KCNB1Q14721 858 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 DHCR24Q15392 516 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 SOWAHCQ53LP3 525 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 LYSMD4Q5XG99 296 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 C12orf40Q86WS4 652 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 PROSER1Q86XN7 944 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 SPATA2LQ8IUW3 424 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 HDDC3Q8N4P3 179 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 FSIP1Q8NA03 581 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 WHAMMQ8TF30 809 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 LEO1Q8WVC0 666 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 PNKPQ96T60 521 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 POLMQ9NP87 494 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 SLC6A14Q9UN76 642 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 STYXL1Q9Y6J8 313 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ADAMTS20P59510 1910 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 ANAPC1Q9H1A4 1944 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 MYOFQ9NZM1 2061 aa10.85□□□□□ -0.67
NPLOC4-220ENST00000576940 LOC400499M0QZD8 3231 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 UPK3BL1B0FP48 263 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 UPK3BL2E5RIL1 263 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 HUS1O60921 280 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 KAT7O95251 611 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SEC24BO95487 1268 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 CYP17A1P05093 508 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 TCF3P15923 654 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 PLCG1P19174 1290 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 LMO2P25791 158 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 RDXP35241 583 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 KIR2DL1P43626 348 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SCAPQ12770 1279 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 MCTP1Q6DN14 999 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SLFN12LQ6IEE8 588 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 RHBDF2Q6PJF5 856 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 PNPLA1Q8N8W4 532 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 C1orf127Q8N9H9 656 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 ZNF560Q96MR9 790 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 CAMK1GQ96NX5 476 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 ABCB6Q9NP58 842 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SMPD4Q9NXE4 827 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 GPSM3Q9Y4H4 160 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 SNX9Q9Y5X1 595 aa10.84□□□□□ -0.67
NPLOC4-220ENST00000576940 MYO18AQ92614 2054 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 TCRBV21S2A2A0A5A6 115 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 H0Y626 953 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 GABRDO14764 452 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 OPHN1O60890 802 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 TRIM16O95361 564 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 ABL1P00519 1130 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 APODP05090 189 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 KRT19P08727 400 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CD59P13987 128 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 BDNFP23560 247 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 GRIK1P39086 918 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 PNPLA4P41247 253 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 KCNA1Q09470 495 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 DUOXA1Q1HG43 343 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 COL28A1Q2UY09 1125 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CFAP221Q4G0U5 840 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 EOGTQ5NDL2 527 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 PEAR1Q5VY43 1037 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 FAM171BQ6P995 826 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF720Q7Z2F6 126 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CSGALNACT2Q8N6G5 542 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 NAT16Q8N8M0 369 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CXorf38Q8TB03 319 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 ERLEC1Q96DZ1 483 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CALML4Q96GE6 196 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 FAM213AQ9BRX8 229 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 CAPN10Q9HC96 672 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 MAGEC2Q9UBF1 373 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 TNRC6BQ9UPQ9 1833 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-220ENST00000576940 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ARHGAP33O14559 1287 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SH3BP5O60239 455 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 IL18RAPO95256 599 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ZIC2O95409 532 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SERPINF2P08697 491 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SCP2P22307 547 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms