RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LEFTY2O00292 366 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 PLK4O00444 970 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CYB561D2O14569 222 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 PPEF2O14830 753 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 SLC16A4O15374 487 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 TNFSF14O43557 240 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 HIP1RO75146 1068 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CILPO75339 1184 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CDC45O75419 566 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 NFICP08651 508 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ATXN1LP0C7T5 689 aaKnown RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 HDCP19113 662 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 MCM7P33993 719 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CCT6AP40227 531 aaKnown RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 GRK6P43250 576 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 GPR15P49685 360 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 SEMG2Q02383 582 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 TOB2Q14106 344 aaPredicted RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 DHCR24Q15392 516 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZBTB6Q15916 424 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 DDR2Q16832 855 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 SV2CQ496J9 727 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CCDC157Q569K6 752 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 C9orf57Q5W0N0 161 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 RUFY3Q7L099 469 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 FILIP1Q7Z7B0 1213 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 TMPRSS12Q86WS5 348 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 DDX42Q86XP3 938 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMG6-219ENST00000575663 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZCCHC9Q8N567 271 aaKnown RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 STKLD1Q8NE28 680 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 FAM212AQ96EL1 285 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZBTB45Q96K62 511 aaPredicted RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 MYRFLQ96LU7 910 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZNF560Q96MR9 790 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 SLC22A12Q96S37 553 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 CYP2S1Q96SQ9 504 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 HNRNPABQ99729 332 aaKnown RBP6.33□□□□□ -1.4
SMG6-219ENST00000575663 TIPINQ9BVW5 301 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 MIR1-1HGQ9H1L0 117 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 POLD4Q9HCU8 107 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ABCB6Q9NP58 842 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 ZDHHC4Q9NPG8 344 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 EHD2Q9NZN4 543 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 GCNT4Q9P109 453 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 AK5Q9Y6K8 562 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 THADAQ6YHU6 1953 aa6.33□□□□□ -1.4
SMG6-219ENST00000575663 A0A0A0MRY4 1105 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 C2orf78A6NCI8 922 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 ANTXRLA6NF34 631 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 LACTBL1A8MY62 500 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 BTBD18B2RXH4 712 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 HNRNPDLO14979 420 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 WISP1O95388 367 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 NTRK1P04629 796 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 OR52Z1P0C646 297 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 NCAM1P13591 858 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 NDUFV2P19404 249 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 CD6P30203 668 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 NTSR1P30989 418 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TNFSF9P41273 254 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 SLC6A11P48066 632 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 LIG4P49917 911 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 CXADRP78310 365 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 MYL7Q01449 175 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 RHDQ02161 417 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 GAD2Q05329 585 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 ORC2Q13416 577 aaPredicted RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 TRIM29Q14134 588 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TMEM132DQ14C87 1099 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 SAFBQ15424 915 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMG6-219ENST00000575663 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 ZC2HC1CQ53FD0 456 aaPredicted RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 C10orf76Q5T2E6 689 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 EMC10Q5UCC4 262 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 SDHAF4Q5VUM1 108 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 WSCD1Q658N2 575 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 JADE1Q6IE81 842 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 KIAA1324Q6UXG2 1013 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 LRRTM3Q86VH5 581 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 C12orf40Q86WS4 652 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 MARCH9Q86YJ5 346 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 SPATA2LQ8IUW3 424 aaPredicted RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 SFTPA1Q8IWL2 248 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 CHPFQ8IZ52 775 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 ADGRG2Q8IZP9 1017 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 FAM181AQ8N9Y4 354 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TERB1Q8NA31 727 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 SNIP1Q8TAD8 396 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 WBP1Q96G27 269 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 FUBP3Q96I24 572 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMG6-219ENST00000575663 RAB34Q9BZG1 259 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms