RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 GCNT1Q02742 428 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 FCHO2Q0JRZ9 810 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 ZNF268Q14587 947 aaPredicted RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 STXBP5Q5T5C0 1151 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 PHLDB3Q6NSJ2 640 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 VITQ6UXI7 678 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 SUGP1Q8IWZ8 645 aaKnown RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 CELF5Q8N6W0 485 aaKnown RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 IRF7Q92985 503 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 JAKMIP2Q96AA8 810 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 HEXIM2Q96MH2 286 aaKnown RBP14.4□□□□□ -0.1
CIITA-210ENST00000575513 NT5C1BQ96P26 610 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 KIF9Q9HAQ2 790 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 PNPLA8Q9NP80 782 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 TMEM30AQ9NV96 361 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 TRPM5Q9NZQ8 1165 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 NCANO14594 1321 aa14.4□□□□□ -0.1
CIITA-210ENST00000575513 GTPBP10A4D1E9 387 aaKnown RBP14.39□□□□□ -0.11
CIITA-210ENST00000575513 DPYSL4O14531 572 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 TNFRSF10BO14763 440 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 CHADO15335 359 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 TADA3O75528 432 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 AP1G2O75843 785 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 CFHP08603 1231 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 CCDC130P13994 396 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 YWHAQP27348 245 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 RAD23BP54727 409 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 STARD6P59095 220 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 USP46P62068 366 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 PRKCQQ04759 706 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SKOR2Q2VWA4 1001 aaPredicted RBP14.39□□□□□ -0.11
CIITA-210ENST00000575513 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SNX30Q5VWJ9 437 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 TXNDC8Q6A555 127 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SIX5Q8N196 739 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 UBR7Q8N806 425 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 MAB21L3Q8N8X9 362 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SLC4A11Q8NBS3 891 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 PDZD8Q8NEN9 1154 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 ST13P5Q8NFI4 369 aaPredicted RBP14.39□□□□□ -0.11
CIITA-210ENST00000575513 FAM81BQ96LP2 452 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SLITRK1Q96PX8 696 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 SMOQ99835 787 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 ARID3AQ99856 593 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 UBXN6Q9BZV1 441 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 MFSD1Q9H3U5 465 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 ARHGEF3Q9NR81 526 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 KRT82Q9NSB4 513 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
CIITA-210ENST00000575513 KRBA1A5PL33 1030 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ZNF840PA6NDX5 716 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ZNF263O14978 683 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 GLULP15104 373 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 NPR3P17342 541 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ORC1Q13415 861 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
CIITA-210ENST00000575513 CAVIN1Q6NZI2 390 aaKnown RBP14.38□□□□□ -0.11
CIITA-210ENST00000575513 SASS6Q6UVJ0 657 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 YAF2Q8IY57 180 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 KIAA1958Q8N8K9 716 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 STKLD1Q8NE28 680 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ZMIZ2Q8NF64 920 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ENOX1Q8TC92 643 aaKnown RBP14.38□□□□□ -0.11
CIITA-210ENST00000575513 PRRX2Q99811 253 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
CIITA-210ENST00000575513 DUSP16Q9BY84 665 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 FBXO44Q9H4M3 255 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 BRD9Q9H8M2 597 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 FAM49BQ9NUQ9 324 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
CIITA-210ENST00000575513 GCNT4Q9P109 453 aa14.38□□□□□ -0.11
CIITA-210ENST00000575513 TRAV19A0A0A6YYK7 116 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
CIITA-210ENST00000575513 PAEPP09466 180 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 TCF3P15923 654 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 AVPR2P30518 371 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 GDI1P31150 447 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 SLC5A3P53794 718 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 MAP3K7CLP57077 242 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 LRMPQ12912 555 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 TAF10Q12962 218 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 ARHGAP29Q52LW3 1261 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 ZNF394Q53GI3 561 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 PPP1R26Q5T8A7 1209 aaPredicted RBP14.37□□□□□ -0.11
CIITA-210ENST00000575513 CLEC20AQ6ZU45 233 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 ENOSF1Q7L5Y1 443 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 PPM1KQ8N3J5 372 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 ANKRD52Q8NB46 1076 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 BPIFB1Q8TDL5 484 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
CIITA-210ENST00000575513 RSPRY1Q96DX4 576 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 LRRC3BQ96PB8 259 aa14.37□□□□□ -0.11
CIITA-210ENST00000575513 NELL2Q99435 816 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms