RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 KRT4P19013 534 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 PCK1P35558 622 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 MSH2P43246 934 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 DPYSL3Q14195 570 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 HHATQ5VTY9 493 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 LVRNQ6Q4G3 990 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 GADL1Q6ZQY3 521 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 C3orf62Q6ZUJ4 267 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 AGAP11Q8TF27 550 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF75CPQ92670 426 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 L3MBTL3Q96JM7 780 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 PAFAH2Q99487 392 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 MPHOSPH6Q99547 160 aaKnown RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 NFKBIZQ9BYH8 718 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 SYNCQ9H7C4 482 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 EBF2Q9HAK2 575 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 CYP3A43Q9HB55 503 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TXLNGQ9NUQ3 528 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 XPO7Q9UIA9 1087 aaKnown RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 USP18Q9UMW8 372 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-204ENST00000574911 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
NCBP3-204ENST00000574911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 HBP1O60381 514 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PGK2P07205 417 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 FGFR1P11362 822 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ATICP31939 592 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 GPD2P43304 727 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 SLC26A2P50443 739 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 CLCN3P51790 818 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 CBLBQ13191 982 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 FAM187BQ17R55 369 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 JADE1Q6IE81 842 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 TLDC1Q6P9B6 456 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 CCDC62Q6P9F0 684 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF276Q8N554 614 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 FAM71DQ8N9W8 422 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 HSPH1Q92598 858 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 TBC1D31Q96DN5 1066 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ZBTB10Q96DT7 871 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 THOC1Q96FV9 657 aaKnown RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 SPATA33Q96N06 139 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 SMARCAD1Q9H4L7 1026 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PRMT7Q9NVM4 692 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ASNSD1Q9NWL6 643 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 A0A0G2JLL6 359 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 A8MUI8 341 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 MCF2LO15068 1137 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 DCTN3O75935 186 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 RNF8O76064 485 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 SLC25A27O95847 323 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 HMGCRP04035 888 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ITGB3P05106 788 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 STAG3L1P0CL83 205 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 RBP3P10745 1247 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 MCF2P10911 925 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 VDRP11473 427 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ZNF143P52747 638 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 AMHR2Q16671 573 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 CYP4V2Q6ZWL3 525 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 OTOAQ7RTW8 1153 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PRRT2Q7Z6L0 340 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PALM2Q8IXS6 379 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 DHX37Q8IY37 1157 aaKnown RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 UTP4Q969X6 686 aaKnown RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 RSAD1Q9HA92 442 aa9.36□□□□□ -0.91
NCBP3-204ENST00000574911 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
NCBP3-204ENST00000574911 MGAMO43451 1857 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 M0QYV0 167 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 HGSO14964 777 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TM9SF1O15321 606 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 WFS1O76024 890 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 C22orf31O95567 290 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 GPD1P21695 349 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 CCND1P24385 295 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 GBP2P32456 591 aaPredicted RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 TNFAIP2Q03169 654 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 POU5F1BQ06416 359 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 NOMO1Q15155 1222 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 PARP6Q2NL67 630 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 BBS9Q3SYG4 887 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ACCSLQ4AC99 568 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 SPDYAQ5MJ70 313 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 NPNTQ6UXI9 565 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 DLK2Q6UY11 383 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 PDIK1LQ8N165 341 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 COPS5Q92905 334 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
NCBP3-204ENST00000574911 ERP27Q96DN0 273 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 STAMBPL1Q96FJ0 436 aa9.35□□□□□ -0.91
NCBP3-204ENST00000574911 LRRC37BQ96QE4 947 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms