RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	TRIM49	P0CI25	452 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	TRIM49C	P0CI26	452 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	CCNE1	P24864	410 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	PIK3CA	P42336	1068 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	PPP3CA	Q08209	521 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	COBLL1	Q53SF7	1204 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	SPOPL	Q6IQ16	392 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	CYP2S1	Q96SQ9	504 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	GTPBP4	Q9BZE4	634 aa	Known RBP	20.71	■□□□□ 0.91
ABR-231	ENST00000574875	ZNF518B	Q9C0D4	1074 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	ELOVL4	Q9GZR5	314 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	TRPC7	Q9HCX4	862 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	GKN1	Q9NS71	199 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	SPATA6	Q9NWH7	488 aa	Predicted RBP	20.71	■□□□□ 0.91
ABR-231	ENST00000574875	EHD2	Q9NZN4	543 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	CCL26	Q9Y258	94 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	CACNA1I	Q9P0X4	2223 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	OBSL1	O75147	1896 aa		20.71	■□□□□ 0.91
ABR-231	ENST00000574875	RPS9	P46781	194 aa	Known RBP	20.7	■□□□□ 0.9
ABR-231	ENST00000574875	MCCD1	P59942	119 aa	Predicted RBP	20.7	■□□□□ 0.9
ABR-231	ENST00000574875	USP46	P62068	366 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	FRMD5	Q7Z6J6	570 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	ZNF687	Q8N1G0	1237 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	TTC8	Q8TAM2	541 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	EEF2KMT	Q96G04	330 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	MSANTD3	Q96H12	275 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	TSG101	Q99816	390 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	MMRN2	Q9H8L6	949 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	KIF9	Q9HAQ2	790 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	GTSE1	Q9NYZ3	720 aa		20.7	■□□□□ 0.9
ABR-231	ENST00000574875	TRAV19	A0A0A6YYK7	116 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	USP17L7	P0C7H9	530 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	GTF2H1	P32780	548 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	CACNA2D1	P54289	1103 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	NOP14	P78316	857 aa	Known RBP	20.69	■□□□□ 0.9
ABR-231	ENST00000574875	TYRO3	Q06418	890 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	ZNF268	Q14587	947 aa	Predicted RBP	20.69	■□□□□ 0.9
ABR-231	ENST00000574875	C1orf228	Q6PIY5	440 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	ACOT1	Q86TX2	421 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	TAS1R2	Q8TE23	839 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	MED10	Q9BTT4	135 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	TTLL2	Q9BWV7	592 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	IMPG2	Q9BZV3	1241 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	LMAN1L	Q9HAT1	526 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	TMEM8A	Q9HCN3	771 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	20.69	■□□□□ 0.9
ABR-231	ENST00000574875	TRPM5	Q9NZQ8	1165 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	COL4A2	P08572	1712 aa		20.69	■□□□□ 0.9
ABR-231	ENST00000574875	ANAPC1	Q9H1A4	1944 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	LAMTOR5	O43504	91 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	SP9	P0CG40	484 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	EPB41	P11171	864 aa	Known RBP	20.68	■□□□□ 0.9
ABR-231	ENST00000574875	HDC	P19113	662 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	SOX9	P48436	509 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	NDST1	P52848	882 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	TNK2	Q07912	1038 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	KRT39	Q6A163	491 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	ANKRD40	Q6AI12	368 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	ISM2	Q6H9L7	571 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	CC2D1A	Q6P1N0	951 aa	Predicted RBP	20.68	■□□□□ 0.9
ABR-231	ENST00000574875	PAQR9	Q6ZVX9	377 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	UNC93A	Q86WB7	457 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	RALGPS2	Q86X27	583 aa	Predicted RBP	20.68	■□□□□ 0.9
ABR-231	ENST00000574875	ADSSL1	Q8N142	457 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	CRYBG2	Q8N1P7	616 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	ARL14EP	Q8N8R7	260 aa	Predicted RBP	20.68	■□□□□ 0.9
ABR-231	ENST00000574875	CCDC150	Q8NCX0	1101 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	SLC22A12	Q96S37	553 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	FAM83C	Q9BQN1	747 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	TMEM30A	Q9NV96	361 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	GCNT4	Q9P109	453 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	ATP8B3	O60423	1300 aa		20.68	■□□□□ 0.9
ABR-231	ENST00000574875	C2orf78	A6NCI8	922 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	SPECC1L-ADORA2A	F8WAN1	911 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	GFRA3	O60609	400 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	CKM	P06732	381 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	ASPA	P45381	313 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	PPP3CC	P48454	512 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	FKBP3	Q00688	224 aa	Known RBP	20.67	■□□□□ 0.9
ABR-231	ENST00000574875	ITPRIPL2	Q3MIP1	535 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	MAML2	Q8IZL2	1156 aa	Predicted RBP	20.67	■□□□□ 0.9
ABR-231	ENST00000574875	NUP93	Q8N1F7	819 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	KCNK16	Q96T55	309 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	CYP3A43	Q9HB55	503 aa		20.67	■□□□□ 0.9
ABR-231	ENST00000574875	APOBEC3G	Q9HC16	384 aa	Known RBP	20.67	■□□□□ 0.9
ABR-231	ENST00000574875	STX10	O60499	249 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	CTH	P32929	405 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	PDE6C	P51160	858 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	PMS1	P54277	932 aa	Known RBP	20.66	■□□□□ 0.9
ABR-231	ENST00000574875	TAF10	Q12962	218 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	RUNX3	Q13761	415 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	STX1A	Q16623	288 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	NKD2	Q969F2	451 aa	Predicted RBP	20.66	■□□□□ 0.9
ABR-231	ENST00000574875	MAN1B1	Q9UKM7	699 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	FBXO4	Q9UKT5	387 aa		20.66	■□□□□ 0.9
ABR-231	ENST00000574875	ZNF840P	A6NDX5	716 aa		20.65	■□□□□ 0.9
ABR-231	ENST00000574875	RTN3	O95197	1032 aa	Predicted RBP	20.65	■□□□□ 0.9
ABR-231	ENST00000574875	ABL1	P00519	1130 aa		20.65	■□□□□ 0.9
ABR-231	ENST00000574875	CHRNB1	P11230	501 aa		20.65	■□□□□ 0.9
ABR-231	ENST00000574875	PFKL	P17858	780 aa		20.65	■□□□□ 0.9

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