RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 KIAA0355O15063 1070 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 PJA2O43164 708 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 KLK10O43240 276 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 DYRK3O43781 588 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 RRP9O43818 475 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 GUCY1B2O75343 617 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 VPS4BO75351 444 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 TAF5LO75529 589 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MED26O95402 600 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SGPL1O95470 568 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 TFRCP02786 760 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 PRNPP04156 253 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 APOA4P06727 396 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A15PP0C7V4 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A14PP0C7W9 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ARP10275 920 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ACADMP11310 421 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 GLULP15104 373 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ATF2P15336 505 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 PORP16435 677 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 TGM1P22735 817 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 LORP23490 312 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 SERPINA4P29622 427 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MAPK4P31152 587 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 VIPR1P32241 457 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 IL13P35225 146 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 PSMC2P35998 433 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 ARL3P36405 182 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 VIPR2P41587 438 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MCM2P49736 904 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CCT4P50991 539 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 PTTG1IPP53801 180 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MLLT6P55198 1093 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 NPEPPSP55786 919 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CLRN1P58418 232 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 KRT17Q04695 432 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CALD1Q05682 793 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 GPS1Q13098 491 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 DUSP8Q13202 625 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MPP3Q13368 585 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MRPL49Q13405 166 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 WTAPQ15007 396 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ACAP1Q15027 740 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SEC23BQ15437 767 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 NFIL3Q16649 462 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MGAT5BQ3V5L5 792 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 GAGE13Q4V321 117 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ZNF569Q5MCW4 686 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM69AQ5T7M9 428 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MANEALQ5VSG8 457 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CACHD1Q5VU97 1274 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SNX30Q5VWJ9 437 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ANO7Q6IWH7 933 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MFSD5Q6N075 450 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 KLHL24Q6TFL4 600 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ATF7IPQ6VMQ6 1270 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 LARP4Q71RC2 724 aaKnown RBP eCLIP2.33□□□□□ -2.04
CHD3-217ENST00000574022 LRRC8DQ7L1W4 858 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 KRT74Q7RTS7 529 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 WFDC3Q8IUB2 231 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SP8Q8IXZ3 490 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 DIS3L2Q8IYB7 885 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 CMTM4Q8IZR5 234 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CNPY4Q8N129 248 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FITM2Q8N6M3 262 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 ANKRD53Q8N9V6 530 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 KYQ8NBH2 561 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CCDC191Q8NCU4 936 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 TMIEQ8NEW7 156 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FLCNQ8NFG4 579 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SLC35B2Q8TB61 432 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 HMGB4Q8WW32 186 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 PPP2R3CQ969Q6 453 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 NSUN4Q96CB9 384 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 APOPT1Q96IL0 206 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 RADILQ96JH8 1075 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 DCAF5Q96JK2 942 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 RPL10LQ96L21 214 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM227BQ96M60 508 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MED15Q96RN5 788 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 YME1L1Q96TA2 773 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MPHOSPH8Q99549 860 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 BAG1Q99933 345 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 GORASP1Q9BQQ3 440 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 TTPALQ9BTX7 342 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 C11orf84Q9BUA3 381 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 SLC46A2Q9BY10 475 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 TTYH3Q9C0H2 523 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SLC6A17Q9H1V8 727 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 EPC1Q9H2F5 836 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SLC6A15Q9H2J7 730 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 SYNCQ9H7C4 482 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 BARX1Q9HBU1 254 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 DIAPH3Q9NSV4 1193 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 MBNL3Q9NUK0 354 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 SEPT11Q9NVA2 429 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM30AQ9NZY2 134 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 DNMT3BQ9UBC3 853 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 HESX1Q9UBX0 185 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms