RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SLC35C1Q96A29 364 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 TCEAL4Q96EI5 215 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 PCED1BQ96HM7 432 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 FUBP3Q96I24 572 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG6-211ENST00000572369 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
SMG6-211ENST00000572369 NIF3L1Q9GZT8 377 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 DPEP3Q9H4B8 488 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 CYP3A43Q9HB55 503 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 ABCB6Q9NP58 842 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 CRTAC1Q9NQ79 661 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 EPS15L1Q9UBC2 864 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 NOTCH4Q99466 2003 aa8.28□□□□□ -1.08
SMG6-211ENST00000572369 PTPRDP23468 1912 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 DOCK8Q8NF50 2099 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 SRRM3A6NNA2 597 aaPredicted RBP8.27□□□□□ -1.09
SMG6-211ENST00000572369 SLC38A8A6NNN8 435 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 DPYSL4O14531 572 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 TRIM66O15016 1216 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 AFPP02771 609 aaKnown RBP8.27□□□□□ -1.09
SMG6-211ENST00000572369 RFX1P22670 979 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 ADORA2BP29275 332 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 CDC25CP30307 473 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 MAGEA11P43364 429 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 ASPAP45381 313 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 FMO5P49326 533 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 GPR15P49685 360 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 ORC1Q13415 861 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 TDGQ13569 410 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 TEAD2Q15562 447 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 SLC5A9Q2M3M2 681 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 CFAP221Q4G0U5 840 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 ZNF394Q53GI3 561 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 CCDC183Q5T5S1 534 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 FAM171BQ6P995 826 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 VSTM1Q6UX27 236 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 UNC93AQ86WB7 457 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 NPAS3Q8IXF0 933 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 TTC39CQ8N584 583 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 STKLD1Q8NE28 680 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 RSAD2Q8WXG1 361 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 SEMA4DQ92854 862 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 BCO2Q9BYV7 579 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 GPR88Q9GZN0 384 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 ELOVL4Q9GZR5 314 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 SDCBP2Q9H190 292 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 APOBEC3GQ9HC16 384 aaKnown RBP8.27□□□□□ -1.09
SMG6-211ENST00000572369 AVENQ9NQS1 362 aaPredicted RBP8.27□□□□□ -1.09
SMG6-211ENST00000572369 FAM49BQ9NUQ9 324 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 GDE1Q9NZC3 331 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 UXTQ9UBK9 157 aaPredicted RBP8.27□□□□□ -1.09
SMG6-211ENST00000572369 FBXL21Q9UKT6 434 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 DENND4CQ5VZ89 1909 aa8.27□□□□□ -1.09
SMG6-211ENST00000572369 OBSL1O75147 1896 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 F8VP50 259 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 CLDN5O00501 218 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 STK25O00506 426 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 SLC30A4O14863 429 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 LRRN2O75325 713 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 AP1G2O75843 785 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 MICAL2O94851 1124 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 TPM2P07951 284 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 CCDC130P13994 396 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 PTMSP20962 102 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 KCNA4P22459 653 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 TBXAS1P24557 533 aaPredicted RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 ERCC5P28715 1186 aaPredicted RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 CCR2P41597 374 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 EPHA5P54756 1037 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 CYP4F8P98187 520 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 STX1AQ16623 288 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 HSP90AA4PQ58FG1 418 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 PRSS36Q5K4E3 855 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 GPR158Q5T848 1215 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 PARM1Q6UWI2 310 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 TMC8Q8IU68 726 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 PPM1KQ8N3J5 372 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 ZSCAN18Q8TBC5 510 aaPredicted RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 MRPS31Q92665 395 aaKnown RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 FGF14Q92915 247 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 TATDN2Q93075 761 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 SMARCD1Q96GM5 515 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 HEXIM2Q96MH2 286 aaKnown RBP8.26□□□□□ -1.09
SMG6-211ENST00000572369 NT5C1BQ96P26 610 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 PKMYT1Q99640 499 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 KXD1Q9BQD3 176 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 B3GNT5Q9BYG0 378 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 ZNF518BQ9C0D4 1074 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 THAP9Q9H5L6 903 aa8.26□□□□□ -1.09
SMG6-211ENST00000572369 ZFP14Q9HCL3 533 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms