RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TCRBV5S1A1TA0A578 114 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SIGLEC16A6NMB1 481 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 APOC4-APOC2K7ER74 178 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 AHCYL1O43865 530 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 APOC2P02655 101 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MYL2P10916 166 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 RXRBP28702 533 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 STIP1P31948 543 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ELK3P41970 407 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SERPINB4P48594 390 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MYL6P60660 151 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ZNF699Q32M78 642 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 KCNT1Q5JUK3 1230 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SLC30A9Q6PML9 568 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 LRRC74BQ6ZQY2 392 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ZC3H18Q86VM9 953 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SLC44A1Q8WWI5 657 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 C12orf65Q9H3J6 166 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 DLGAP2Q9P1A6 1054 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 VWA5AO00534 786 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PIAS1O75925 651 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 KRT36O76013 467 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TNNC2P02585 160 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PYGBP11216 843 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 CDH5P33151 784 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 RFC1P35251 1148 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 FAAP100Q0VG06 881 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 DPYSL3Q14195 570 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PRKD1Q15139 912 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 FNIP1Q8TF40 1166 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MZB1Q8WU39 189 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SCG3Q8WXD2 468 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 GMLQ99445 158 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 RSAD1Q9HA92 442 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ZNF212Q9UDV6 495 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 H7C0C1 242 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TMEM63AO94886 807 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 RFC5P40937 340 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ATP5OP48047 213 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 GRM1Q13255 1194 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MTM1Q13496 603 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TFDP2Q14188 446 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SEZ6Q53EL9 994 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ZBTB33Q86T24 672 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SLC26A11Q86WA9 606 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 UNC45BQ8IWX7 931 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 UBR7Q8N806 425 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 TEKT4Q8WW24 435 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 HSPH1Q92598 858 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 MTMR12Q9C0I1 747 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 WWP1Q9H0M0 922 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 FBXO6Q9NRD1 293 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 NRBP2Q9NSY0 501 aa11.24□□□□□ -0.61
CCDC40-207ENST00000572253 STX18Q9P2W9 335 aaKnown RBP11.24□□□□□ -0.61
CCDC40-207ENST00000572253 IL1BP01584 269 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 GSTA2P09210 222 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 WEE2P0C1S8 567 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 NEK3P51956 506 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TMPRSS15P98073 1019 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TFAMQ00059 246 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 SLC18A2Q05940 514 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 ACSBG2Q5FVE4 666 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 EP400NLQ6ZTU2 488 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 PPM1NQ8N819 430 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 DTX3LQ8TDB6 740 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 CFAP36Q96G28 342 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 HAPLN2Q9GZV7 340 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 KCNK4Q9NYG8 393 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 PPARGC1AQ9UBK2 798 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 TCRBV9S1A1TA0A576 114 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 B2RBV5 119 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 KBTBD13C9JR72 458 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 SPECC1L-ADORA2AF8WAN1 911 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 LRCH4O75427 683 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
CCDC40-207ENST00000572253 DHRS4L1P0CG22 281 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 EFNA5P52803 228 aa11.23□□□□□ -0.61
CCDC40-207ENST00000572253 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms