RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 CMTM8Q8IZV2 173 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 FUKQ8N0W3 1084 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 EHBP1Q8NDI1 1231 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 DNASE1L2Q92874 299 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 KHSRPQ92945 711 aaKnown RBP eCLIP14.78□□□□□ -0.04
RPAIN-211ENST00000572174 IRF7Q92985 503 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 TATDN2Q93075 761 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 KXD1Q9BQD3 176 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 TRMT61BQ9BVS5 477 aaKnown RBP14.78□□□□□ -0.04
RPAIN-211ENST00000572174 INTS2Q9H0H0 1204 aaKnown RBP14.78□□□□□ -0.04
RPAIN-211ENST00000572174 MFSD1Q9H3U5 465 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 CSNK1G1Q9HCP0 422 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 FAM49BQ9NUQ9 324 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 THG1LQ9NWX6 298 aaKnown RBP14.78□□□□□ -0.04
RPAIN-211ENST00000572174 HESX1Q9UBX0 185 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 HMGXB4Q9UGU5 601 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 KMT2EQ8IZD2 1858 aa14.78□□□□□ -0.04
RPAIN-211ENST00000572174 KCNJ18B7U540 433 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 CLDN5O00501 218 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 F11P03951 625 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 USP17L7P0C7H9 530 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 CCDC130P13994 396 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 GJA1P17302 382 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 NPR3P17342 541 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 YWHAQP27348 245 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 MFAP3P55082 362 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 PLCB2Q00722 1185 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 ZNF268Q14587 947 aaPredicted RBP14.77□□□□□ -0.05
RPAIN-211ENST00000572174 ZNF394Q53GI3 561 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 SDHAF4Q5VUM1 108 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 MON1AQ86VX9 555 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 ARID3BQ8IVW6 561 aaPredicted RBP14.77□□□□□ -0.05
RPAIN-211ENST00000572174 CELF5Q8N6W0 485 aaKnown RBP14.77□□□□□ -0.05
RPAIN-211ENST00000572174 RSAD2Q8WXG1 361 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 MSANTD3Q96H12 275 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 TUBGCP2Q9BSJ2 902 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
RPAIN-211ENST00000572174 PES1O00541 588 aaKnown RBP14.76□□□□□ -0.05
RPAIN-211ENST00000572174 VDRP11473 427 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ADORA2BP29275 332 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TUBP50607 506 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 CDR1P51861 262 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 SLC5A3P53794 718 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 BCAT1P54687 386 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 RAD23BP54727 409 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 CYP4F8P98187 520 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 LRMPQ12912 555 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 VWA3BQ502W6 1294 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ARHGAP29Q52LW3 1261 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TCP11X2Q5H9J9 407 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ARHGAP17Q68EM7 881 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TRIM65Q6PJ69 517 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 MFSD6LQ8IWD5 586 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 KIAA1958Q8N8K9 716 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 MAB21L3Q8N8X9 362 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 SLC4A11Q8NBS3 891 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 LMO3Q8TAP4 145 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 PBXIP1Q96AQ6 731 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ELMO3Q96BJ8 720 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TWNKQ96RR1 684 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ARID3AQ99856 593 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 DUSP16Q9BY84 665 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 NDST4Q9H3R1 872 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TRPV5Q9NQA5 729 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 TMEM63CQ9P1W3 806 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 APEX2Q9UBZ4 518 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 PCDHB4Q9Y5E5 795 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ZDBF2Q9HCK1 2354 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 ZNF318Q5VUA4 2279 aa14.76□□□□□ -0.05
RPAIN-211ENST00000572174 HEPACAM2A8MVW5 462 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 ZNF263O14978 683 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 MED7O43513 233 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 CKMP06732 381 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 CD19P15391 556 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 FCARP24071 287 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 PSEN1P49768 467 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 PRKCQQ04759 706 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 TYRO3Q06418 890 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 ORC1Q13415 861 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 TANGO2Q6ICL3 276 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 CC2D1AQ6P1N0 951 aaPredicted RBP14.75□□□□□ -0.05
RPAIN-211ENST00000572174 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 CLEC20AQ6ZU45 233 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 PAQR9Q6ZVX9 377 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 TMEM150AQ86TG1 271 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 TADA2BQ86TJ2 420 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 DDX42Q86XP3 938 aaKnown RBP eCLIP14.75□□□□□ -0.05
RPAIN-211ENST00000572174 IRF2BP1Q8IU81 584 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 FBXL6Q8N531 539 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 BPIFB1Q8TDL5 484 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 ASIC4Q96FT7 647 aa14.75□□□□□ -0.05
RPAIN-211ENST00000572174 ZSWIM3Q96MP5 696 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms