RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PAQR9Q6ZVX9 377 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 C12orf29Q8N999 325 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 CCDC150Q8NCX0 1101 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 SEMA4DQ92854 862 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 TWNKQ96RR1 684 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 EBF3Q9H4W6 596 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 KRT82Q9NSB4 513 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRPM5Q9NZQ8 1165 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 ATP8B3O60423 1300 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 ZDBF2Q9HCK1 2354 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 AP1G2O75843 785 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 USP17L7P0C7H9 530 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 ADORA2BP29275 332 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 MXI1P50539 228 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 FKBP3Q00688 224 aaKnown RBP18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 TAF10Q12962 218 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 FZD5Q13467 585 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 STIM1Q13586 685 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 COBLL1Q53SF7 1204 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 CC2D1AQ6P1N0 951 aaPredicted RBP18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 TXNDC11Q6PKC3 985 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 FUKQ8N0W3 1084 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 NIF3L1Q9GZT8 377 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 LMAN1LQ9HAT1 526 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 R4GN57 208 aa18.89■□□□□ 0.61
CTDNEP1-207ENST00000572043 PSMA7O14818 248 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 LAMTOR5O43504 91 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 ARSAP15289 507 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 HDCP19113 662 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 GTF2H1P32780 548 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CTHP32929 405 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 PLCB2Q00722 1185 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 ENPEPQ07075 957 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CBWD6Q4V339 395 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CBWD3Q5JTY5 395 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CBWD5Q5RIA9 395 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 MAML2Q8IZL2 1156 aaPredicted RBP18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CLDN23Q96B33 292 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 SMARCD1Q96GM5 515 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 TTLL2Q9BWV7 592 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 C8orf33Q9H7E9 229 aaPredicted RBP18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 DMAP1Q9NPF5 467 aaPredicted RBP18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 HPS4Q9NQG7 708 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 RBM12Q9NTZ6 932 aaKnown RBP18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 EHD2Q9NZN4 543 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SLC16A3O15427 465 aaKnown RBP18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 STX10O60499 249 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 GFRA3O60609 400 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 BEST1O76090 585 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SP9P0CG40 484 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 BMP6P22004 513 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 YWHAQP27348 245 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 NBL1P41271 181 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SLC5A3P53794 718 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 MAP3K7CLP57077 242 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 CSTF1Q05048 431 aaKnown RBP18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 LRRC63Q05C16 580 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 MTF1Q14872 753 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 PON2Q15165 354 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZNF394Q53GI3 561 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 TSSK4Q6SA08 328 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 UNC93AQ86WB7 457 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 ELOA2Q8IYF1 753 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZNF687Q8N1G0 1237 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 CRYBG2Q8N1P7 616 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 FBXL13Q8NEE6 735 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SCAMP5Q8TAC9 235 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SH3RF2Q8TEC5 729 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 FBXO32Q969P5 355 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 DHTKD1Q96HY7 919 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 FAM83CQ9BQN1 747 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 CYP3A43Q9HB55 503 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 RAB20Q9NX57 234 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 SMPD4Q9NXE4 827 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 CTNND2Q9UQB3 1225 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 WNT6Q9Y6F9 365 aa18.87■□□□□ 0.61
CTDNEP1-207ENST00000572043 OTOL1A6NHN0 477 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 CHRNB1P11230 501 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ANP32AP39687 249 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 MTAPQ13126 283 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 RUNX3Q13761 415 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZNF268Q14587 947 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZNF77Q15935 545 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 CAMK4Q16566 473 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ITPRIPL2Q3MIP1 535 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ASCL5Q7RTU5 278 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 ZC3H3Q8IXZ2 948 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 NELFBQ8WX92 580 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 SLITRK1Q96PX8 696 aa18.86■□□□□ 0.61
CTDNEP1-207ENST00000572043 SMOQ99835 787 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms