RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 PCMTD1Q96MG8 357 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-209ENST00000571558 CEP72Q9P209 647 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 CAPN11Q9UMQ6 739 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 DAAM1Q9Y4D1 1078 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 BACE2Q9Y5Z0 518 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
RPAIN-209ENST00000571558 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.66□□□□□ -0.06
RPAIN-209ENST00000571558 SHISA7A6NL88 538 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 KIF4AO95239 1232 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 KRT19P08727 400 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 PTPN2P17706 415 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 TRIM21P19474 475 aaKnown RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 IGFBP6P24592 240 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 RPL9P32969 192 aaKnown RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 POLR2FP61218 127 aaKnown RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 NOP14P78316 857 aaKnown RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 GCNT1Q02742 428 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 LRMPQ12912 555 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 UPP1Q16831 310 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 ZNF699Q32M78 642 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 PRR23CQ6ZRP0 262 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 DRC7Q8IY82 874 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 HPDLQ96IR7 371 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 KREMEN1Q96MU8 473 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 UROC1Q96N76 676 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 NT5C1BQ96P26 610 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 PAAF1Q9BRP4 392 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 TRMT61BQ9BVS5 477 aaKnown RBP14.65□□□□□ -0.06
RPAIN-209ENST00000571558 GPR88Q9GZN0 384 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 BRD9Q9H8M2 597 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.65□□□□□ -0.065e-6■■■■□ 23.1
RPAIN-209ENST00000571558 HCFC1R1Q9NWW0 138 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
RPAIN-209ENST00000571558 TMEM189-UBE2V1I3L0A0 370 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 ZNF197O14709 1029 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 TRAPPC3O43617 180 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 MFAP3LO75121 409 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 RHOP08100 348 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 FGFR3P22607 806 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 CASP14P31944 242 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 ASPAP45381 313 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 CXCL12P48061 93 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 CLCNKBP51801 687 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 JAM2P57087 298 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 SHC2P98077 582 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 DMWDQ09019 674 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 SIM2Q14190 667 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-209ENST00000571558 WDR44Q5JSH3 913 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 TANGO2Q6ICL3 276 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 CD300LGQ6UXG3 332 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 ANKS3Q6ZW76 656 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 TC2NQ8N9U0 490 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 C3orf58Q8NDZ4 430 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 RABGGTAQ92696 567 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 KAT5Q92993 513 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 MCRS1Q96EZ8 462 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 MSANTD3Q96H12 275 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 FAXDC2Q96IV6 333 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 IMPG2Q9BZV3 1241 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 NIF3L1Q9GZT8 377 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 ZFP14Q9HCL3 533 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 UBE2TQ9NPD8 197 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-209ENST00000571558 DNAJC12Q9UKB3 198 aa14.64□□□□□ -0.07
RPAIN-209ENST00000571558 COL4A3Q01955 1670 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ARHGEF37A1IGU5 675 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 CASTOR2A6NHX0 329 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PODXLO00592 558 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ADAM12O43184 909 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PAPSS2O95340 614 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PNPLA4P41247 253 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 LIMK1P53667 647 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 LILRA4P59901 499 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ZBED6P86452 979 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 GOLGA8FQ08AF8 430 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 GOLGA8DPQ0D2H9 430 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PRR23BQ6ZRT6 265 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 RRAGAQ7L523 313 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 LIMS2Q7Z4I7 341 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PPM1KQ8N3J5 372 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 SPEM1Q8N4L4 309 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 UBR7Q8N806 425 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 HASPINQ8TF76 798 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 CPLX3Q8WVH0 158 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ING5Q8WYH8 240 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 FAM3CQ92520 227 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 DDX27Q96GQ7 796 aaKnown RBP14.63□□□□□ -0.07
RPAIN-209ENST00000571558 DNAJC7Q99615 494 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 ARID3AQ99856 593 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 STK33Q9BYT3 514 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 PLA2G2FQ9BZM2 168 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 LMAN1LQ9HAT1 526 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 NLRC4Q9NPP4 1024 aa14.63□□□□□ -0.07
RPAIN-209ENST00000571558 LUC7L2Q9Y383 392 aaKnown RBP14.63□□□□□ -0.07
RPAIN-209ENST00000571558 DOCK6Q96HP0 2047 aa14.62□□□□□ -0.07
RPAIN-209ENST00000571558 CEP295Q9C0D2 2601 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms