RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 E5RJQ4 531 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 MAFGO15525 162 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 TBX10O75333 385 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 INHBAP08476 426 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 SP2Q02086 613 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ORC1Q13415 861 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 GNPTABQ3T906 1256 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ZC3H12AQ5D1E8 599 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 SNRNP48Q6IEG0 339 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 BBS12Q6ZW61 710 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 SPATS2LQ9NUQ6 558 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 WNT10BO00744 389 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 CLGNO14967 610 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 RBP3P10745 1247 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ETV4P43268 484 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 NAMPTP43490 491 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 PRKD1Q15139 912 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 CCDC62Q6P9F0 684 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ALYREFQ86V81 257 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ZC3H18Q86VM9 953 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 NIPA2Q8N8Q9 360 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 CYTH4Q9UIA0 394 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 MTO1Q9Y2Z2 717 aaKnown RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 RGPD3A6NKT7 1758 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-205ENST00000571272 RGPD4Q7Z3J3 1758 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ADGRA2Q96PE1 1338 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
SCARF1-205ENST00000571272 IQANK1A0A1B0GTG1 560 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 DPYSL3Q14195 570 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 RCN2Q14257 317 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 NPNTQ6UXI9 565 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 MECRQ9BV79 373 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 NMUR2Q9GZQ4 415 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCARF1-205ENST00000571272 FCHO1O14526 889 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 PSMG1O95456 288 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 KRT7P08729 469 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SUPT20HL2P0C7V6 817 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 RFC5P40937 340 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 PSMC1P62191 440 aaKnown RBP18.25■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF200P98182 395 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SATB1Q01826 763 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 TAP1Q03518 808 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SUPT20HL1Q3ZLR7 823 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 CDHR3Q6ZTQ4 885 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 POLNQ7Z5Q5 900 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 CTAGE3PQ8IX95 158 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SPATA18Q8TC71 538 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SLC7A3Q8WY07 619 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 APOPT1Q96IL0 206 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
SCARF1-205ENST00000571272 NXF1Q9UBU9 619 aaKnown RBP18.25■□□□□ 0.51
SCARF1-205ENST00000571272 SMIM24O75264 130 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 DHRS4L1P0CG22 281 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 GCLCP48506 637 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 NEK3P51956 506 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 TFAMQ00059 246 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 HADHQ16836 314 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 XRRA1Q6P2D8 792 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 PRPF39Q86UA1 669 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 PDCD7Q8N8D1 485 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 STMN2Q93045 179 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 OXNAD1Q96HP4 312 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SIGLEC16A6NMB1 481 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 PIGRP01833 764 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SERPINB4P48594 390 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 TRPC3Q13507 836 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 THOC5Q13769 683 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 LRRC74BQ6ZQY2 392 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 FAM136AQ96C01 138 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 CFAP36Q96G28 342 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 TUBB6Q9BUF5 446 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 DHX33Q9H6R0 707 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF302Q9NR11 478 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 ABCD1P33897 745 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 RAP1GAPP47736 663 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 MAP3K10Q02779 954 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SLC34A1Q06495 639 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 MMRN1Q13201 1228 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 CMPK2Q5EBM0 449 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 FBXO27Q8NI29 283 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SLC44A1Q8WWI5 657 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 PPP1R12CQ9BZL4 782 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF518BQ9C0D4 1074 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 IQCGQ9H095 443 aaKnown RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 SYNCQ9H7C4 482 aa18.24■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF395Q9H8N7 513 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-205ENST00000571272 MCF2LO15068 1137 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 DNAJC6O75061 913 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms