RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 EML5Q05BV3 1969 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 GREB1Q4ZG55 1949 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 MYO18AQ92614 2054 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 F8VP50 259 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 LEFTY2O00292 366 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CLDN5O00501 218 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SPTLC2O15270 562 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 TGFB1I1O43294 461 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CLSTN1O94985 981 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 EPN2O95208 641 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF806P0C7X5 589 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 WARSP23381 471 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ANXA13P27216 316 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 GBP1P32455 592 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 GNL1P36915 607 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 MPLP40238 635 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 MAGEA11P43364 429 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 DGKEP52429 567 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CACNA2D1P54289 1103 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CREB5Q02930 508 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SURF1Q15526 300 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 E2F4Q16254 413 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SNRNP35Q16560 246 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 PLK5Q496M5 336 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 FAM26FQ5R3K3 315 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SHC4Q6S5L8 630 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 DENND5BQ6ZUT9 1274 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 STXBP4Q6ZWJ1 553 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SYT13Q7L8C5 426 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 DPH6Q7L8W6 267 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 WDR49Q8IV35 697 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SFTPA1Q8IWL2 248 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 MYCBPAPQ8TBZ2 947 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ATP2A3Q93084 1043 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 FUBP3Q96I24 572 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CHAMP1Q96JM3 812 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 FNBP1Q96RU3 617 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 TPSD1Q9BZJ3 242 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF518BQ9C0D4 1074 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 TNMDQ9H2S6 317 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZDHHC4Q9NPG8 344 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 AGPAT3Q9NRZ7 376 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 TMEM30AQ9NV96 361 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 KBTBD4Q9NVX7 518 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRPM5Q9NZQ8 1165 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 NXF1Q9UBU9 619 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 ARHGAP26Q9UNA1 814 aa9.19□□□□□ -0.94
CTDNEP1-203ENST00000570385 CCDC163A0A0D9SF12 145 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF840PA6NDX5 716 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 A8MXQ7 604 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 KIAA0391O15091 583 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 APBB3O95704 486 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 PTPN1P18031 435 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 OPRD1P41143 372 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 AFMP43652 599 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 SLC6A11P48066 632 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CASP4P49662 377 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 MYL6P60660 151 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 TNNC1P63316 161 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CYP24A1Q07973 514 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 MESP2Q0VG99 397 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 TAF10Q12962 218 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 NR1H3Q13133 447 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRPC3Q13507 836 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 MAPRE1Q15691 268 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 WDR72Q3MJ13 1102 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 FBXO43Q4G163 708 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 N4BP2L1Q5TBK1 243 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 STPG1Q5TH74 334 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 ANO7Q6IWH7 933 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 FILIP1Q7Z7B0 1213 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 TSTD1Q8NFU3 115 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 SCFD1Q8WVM8 642 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF516Q92618 1163 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 LOXL4Q96JB6 756 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 SPATA17Q96L03 361 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 B3GNT5Q9BYG0 378 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 DUSP15Q9H1R2 295 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZSCAN16Q9H4T2 348 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 SLC39A2Q9NP94 309 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CFAP97Q9P2B7 532 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CPQQ9Y646 472 aa9.18□□□□□ -0.94
CTDNEP1-203ENST00000570385 CACNA1GO43497 2377 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 MYO16Q9Y6X6 1858 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 K7EQS6 105 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRIM66O15016 1216 aa9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 POLR2DO15514 142 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-203ENST00000570385 PHACTR2O75167 634 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms