RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RAD51CO43502 376 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 LRCH4O75427 683 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM163BP0C2L3 166 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 PIGHQ14442 188 aaPredicted RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 CLEC20AQ6ZU45 233 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 PIGZQ86VD9 579 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 APBB2Q92870 758 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 DUSP16Q9BY84 665 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 ELAC1Q9H777 363 aaKnown RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 CYP11A1P05108 521 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC13A5Q86YT5 568 aaPredicted RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 STK32AQ8WU08 396 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 TMLHEQ9NVH6 421 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 GLI1P08151 1106 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 MYBL2P10244 700 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 NPR3P17342 541 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 ITGB8P26012 769 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 IL1R2P27930 398 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 PBX3P40426 434 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 SIX1Q15475 284 aaPredicted RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 C1orf53Q5VUE5 145 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.5□□□□□ -0.578e-8■■□□□ 13.8
PDXDC1-216ENST00000569715 ABI1Q8IZP0 508 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 FNIP1Q8TF40 1166 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 NRDE2Q9H7Z3 1164 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 CDH9Q9ULB4 789 aa11.5□□□□□ -0.57
PDXDC1-216ENST00000569715 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 MAP3K7CLP57077 242 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC6A3Q01959 620 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC25A11Q02978 314 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 LRRTM3Q86VH5 581 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 KATNAL2Q8IYT4 538 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 RXFP2Q8WXD0 754 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 MYLPFQ96A32 169 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 CFAP57Q96MR6 1250 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM39AQ9NV64 488 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 LRFN2Q9ULH4 789 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 ESYT3A0FGR9 886 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 TARSL2A2RTX5 802 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 ADIGQ0VDE8 80 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 OVOS1Q6IE37 1185 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 CCDC50Q8IVM0 306 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 ZMIZ2Q8NF64 920 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SMOQ99835 787 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 AMACRQ9UHK6 382 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 TFE3P19532 575 aaPredicted RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 GPD1P21695 349 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 PCSK1P29120 753 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 PLCB3Q01970 1234 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 TRADDQ15628 312 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 CDO1Q16878 200 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 KCNT1Q5JUK3 1230 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 WDR93Q6P2C0 686 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 GPRIN1Q7Z2K8 1008 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 PKMYT1Q99640 499 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 HEMGNQ9BXL5 484 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 C11orf49Q9H6J7 331 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 STIM2Q9P246 746 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 KANSL3Q9P2N6 904 aa11.49□□□□□ -0.57
PDXDC1-216ENST00000569715 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 AP1G2O75843 785 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 HEXIM1O94992 359 aaKnown RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 KRT1P04264 644 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 CLTBP09497 229 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM200BP0CF97 657 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 RARAP10276 462 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 RALAP11233 206 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 NDUFV1P49821 464 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ZNF143P52747 638 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 METTL23Q86XA0 190 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 RAPGEF5Q92565 580 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 B3GALT6Q96L58 329 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 PEBP4Q96S96 227 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 DNAI2Q9GZS0 605 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 PCSK1NQ9UHG2 260 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TBKBP1A7MCY6 615 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 CCDC188H7C350 402 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 UPP2O95045 317 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 OR4Q2P0C623 313 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ATP11AP98196 1134 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms