RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	NOTCH4	Q99466	2003 aa		4.29	□□□□□ -1.72
UBR1-209	ENST00000569243	WDR17	Q8IZU2	1322 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	BCAR3	O75815	825 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	CLCN2	P51788	898 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	GPSM2	P81274	684 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	CCDC157	Q569K6	752 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	ATAT1	Q5SQI0	421 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	KIRREL2	Q6UWL6	708 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	ZNF813	Q6ZN06	617 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	MRPL10	Q7Z7H8	261 aa	Known RBP	4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	TERB1	Q8NA31	727 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	HPS3	Q969F9	1004 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	RITA1	Q96K30	269 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	MAP3K14	Q99558	947 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	GTPBP4	Q9BZE4	634 aa	Known RBP	4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	VPS16	Q9H269	839 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	TRMT13	Q9NUP7	481 aa	Known RBP	4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	TFCP2L1	Q9NZI6	479 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	XPR1	Q9UBH6	696 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243	COL4A3BP	Q9Y5P4	624 aa		4.28	□□□□□ -1.72
UBR1-209	ENST00000569243		A0A088AWK7	358 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	BTBD19	C9JJ37	291 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243		E5RJQ4	531 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	MYO1C	O00159	1063 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	KCNJ5	P48544	419 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	SP2	Q02086	613 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	MYO1E	Q12965	1108 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	MGAT5B	Q3V5L5	792 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	NAPRT	Q6XQN6	538 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	ZNF398	Q8TD17	642 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	OSCP1	Q8WVF1	389 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	XAGE5	Q8WWM1	108 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	R3HDM4	Q96D70	268 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	C5orf34	Q96MH7	638 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	FYTTD1	Q96QD9	318 aa	Known RBP	4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	FAM118B	Q9BPY3	351 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	CNNM1	Q9NRU3	951 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	PIH1D1	Q9NWS0	290 aa	Known RBP	4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	ANKRD6	Q9Y2G4	727 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	STXBP5L	Q9Y2K9	1186 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	TMX2	Q9Y320	296 aa		4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	LUC7L2	Q9Y383	392 aa	Known RBP	4.27	□□□□□ -1.73
UBR1-209	ENST00000569243	KCNU1	A8MYU2	1149 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243		M0R3H8	397 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	FGB	P02675	491 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	CSF1R	P07333	972 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	PHKG2	P15735	406 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	SLC11A2	P49281	568 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	DGKE	P52429	567 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	ARFIP2	P53365	341 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	EVA1C	P58658	441 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	LINC00205	P59089	165 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	FHL3	Q13643	280 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	MEX3C	Q5U5Q3	659 aa	Known RBP	4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	MIS18BP1	Q6P0N0	1132 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	SLC2A7	Q6PXP3	512 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	CATIP	Q7Z7H3	387 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	SFTPA1	Q8IWL2	248 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	SLC15A3	Q8IY34	581 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	PRSS3P2	Q8NHM4	247 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	ADAMTS18	Q8TE60	1221 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	KBTBD7	Q8WVZ9	684 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	COQ8B	Q96D53	544 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	MRGPRX1	Q96LB2	322 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	LENG8	Q96PV6	779 aa	Predicted RBP	4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	MACROD1	Q9BQ69	325 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	SH2D3A	Q9BRG2	576 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	HOMER2	Q9NSB8	354 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	PCDHA6	Q9UN73	950 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	PAXBP1	Q9Y5B6	917 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243	FER1L4	A9Z1Z3	1794 aa		4.26	□□□□□ -1.73
UBR1-209	ENST00000569243		A0A087WWL8	130 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	CYP2A6	P11509	494 aa	Predicted RBP	4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	UCP3	P55916	312 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	FGL2	Q14314	439 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	FCRL6	Q6DN72	434 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	ZBTB46	Q86UZ6	589 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	RAB11FIP4	Q86YS3	637 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	IZUMO1	Q8IYV9	350 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	ABRA	Q8N0Z2	381 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	KRT78	Q8N1N4	520 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	CXorf36	Q9H7Y0	433 aa		4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	GAR1	Q9NY12	217 aa	Known RBP	4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	CCNL1	Q9UK58	526 aa	Predicted RBP	4.25	□□□□□ -1.73
UBR1-209	ENST00000569243	TCRBV5S1A1T	A0A578	114 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	MYMK	A6NI61	221 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243		H3BML4	177 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	SOCS2	O14508	198 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	OFD1	O75665	1012 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	A1BG	P04217	495 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	ALDH2	P05091	517 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	TMEM191B	P0C7N4	346 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	KCNA3	P22001	575 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	ATP5F1	P24539	256 aa	Predicted RBP	4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	IL1R2	P27930	398 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	HTRA4	P83105	476 aa	Predicted RBP	4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	ZNF628	Q5EBL2	1059 aa		4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.24	□□□□□ -1.73
UBR1-209	ENST00000569243	CAND1	Q86VP6	1230 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms