RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 APOBEC3GQ9HC16 384 aaKnown RBP21.43■■□□□ 1.02
ABCA3-206ENST00000569062 TMEM8AQ9HCN3 771 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 SPATA6Q9NWH7 488 aaPredicted RBP21.43■■□□□ 1.02
ABCA3-206ENST00000569062 F5P12259 2224 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 TRIM49BA6NDI0 452 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 PROB1E7EW31 1015 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 NCAM2O15394 837 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 KINO60870 393 aaKnown RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 EPB41P11171 864 aaKnown RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 NDST1P52848 882 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 MLLT6P55198 1093 aaPredicted RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 NOP14P78316 857 aaKnown RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 FAM35AQ86V20 835 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 ELOA2Q8IYF1 753 aaPredicted RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 ADSSL1Q8N142 457 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 ARL14EPQ8N8R7 260 aaPredicted RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 PIEZO1Q92508 2521 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 KCNK16Q96T55 309 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 MED10Q9BTT4 135 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 TTLL2Q9BWV7 592 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 KIF9Q9HAQ2 790 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 GKN1Q9NS71 199 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 THG1LQ9NWX6 298 aaKnown RBP21.42■■□□□ 1.02
ABCA3-206ENST00000569062 MAN1B1Q9UKM7 699 aa21.42■■□□□ 1.02
ABCA3-206ENST00000569062 TRAV19A0A0A6YYK7 116 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 MAGEA9P43362 315 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 RPS9P46781 194 aaKnown RBP21.41■■□□□ 1.02
ABCA3-206ENST00000569062 PLCB2Q00722 1185 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 IFRD2Q12894 506 aaPredicted RBP21.41■■□□□ 1.02
ABCA3-206ENST00000569062 ZNF268Q14587 947 aaPredicted RBP21.41■■□□□ 1.02
ABCA3-206ENST00000569062 KRT39Q6A163 491 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 TRIM68Q6AZZ1 485 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 TXNDC11Q6PKC3 985 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 ZC3H3Q8IXZ2 948 aaKnown RBP21.41■■□□□ 1.02
ABCA3-206ENST00000569062 TSG101Q99816 390 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 FAM83CQ9BQN1 747 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 IMPG2Q9BZV3 1241 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 C8orf33Q9H7E9 229 aaPredicted RBP21.41■■□□□ 1.02
ABCA3-206ENST00000569062 GCNT4Q9P109 453 aa21.41■■□□□ 1.02
ABCA3-206ENST00000569062 FANCMQ8IYD8 2048 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 SPECC1L-ADORA2AF8WAN1 911 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 CKMP06732 381 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 USP17L7P0C7H9 530 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 SP9P0CG40 484 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 CCDC130P13994 396 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 CD44P16070 742 aaKnown RBP21.4■■□□□ 1.02
ABCA3-206ENST00000569062 UNC93AQ86WB7 457 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 FUKQ8N0W3 1084 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 CRYBG2Q8N1P7 616 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 C12orf29Q8N999 325 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 TTC16Q8NEE8 873 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 SEMA4DQ92854 862 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 TWNKQ96RR1 684 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 LMAN1LQ9HAT1 526 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 HPS4Q9NQG7 708 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 TRPM5Q9NZQ8 1165 aa21.4■■□□□ 1.02
ABCA3-206ENST00000569062 ATP8B3O60423 1300 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 LAMTOR5O43504 91 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 CHRNB1P11230 501 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 HDCP19113 662 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 GTF2H1P32780 548 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 CTHP32929 405 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 MXI1P50539 228 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 FKBP3Q00688 224 aaKnown RBP21.39■■□□□ 1.01
ABCA3-206ENST00000569062 TAF10Q12962 218 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 ZNF77Q15935 545 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 WDR44Q5JSH3 913 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 RALGPS2Q86X27 583 aaPredicted RBP21.39■■□□□ 1.01
ABCA3-206ENST00000569062 NUP93Q8N1F7 819 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 SMARCD1Q96GM5 515 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 MSANTD3Q96H12 275 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 EBF3Q9H4W6 596 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 FAM49BQ9NUQ9 324 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 EHD2Q9NZN4 543 aa21.39■■□□□ 1.01
ABCA3-206ENST00000569062 ZNF840PA6NDX5 716 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 OTOL1A6NHN0 477 aaPredicted RBP21.38■■□□□ 1.01
ABCA3-206ENST00000569062 SLC16A3O15427 465 aaKnown RBP21.38■■□□□ 1.01
ABCA3-206ENST00000569062 GFRA3O60609 400 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 AP1G2O75843 785 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 BEST1O76090 585 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 BMP6P22004 513 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 LRRC63Q05C16 580 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 INCA1Q0VD86 236 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 MTAPQ13126 283 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 RUNX3Q13761 415 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 MTF1Q14872 753 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 ITPRIPL2Q3MIP1 535 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 DCAF17Q5H9S7 520 aaPredicted RBP21.38■■□□□ 1.01
ABCA3-206ENST00000569062 TCERG1LQ5VWI1 586 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 ASCL5Q7RTU5 278 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 CCDC150Q8NCX0 1101 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 ZMIZ2Q8NF64 920 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 SLC2A14Q8TDB8 520 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
ABCA3-206ENST00000569062 NIF3L1Q9GZT8 377 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 CYP3A43Q9HB55 503 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 DMAP1Q9NPF5 467 aaPredicted RBP21.38■■□□□ 1.01
ABCA3-206ENST00000569062 KRT82Q9NSB4 513 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 R4GN57 208 aa21.38■■□□□ 1.01
ABCA3-206ENST00000569062 TNFRSF10BO14763 440 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms