RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	PARS2	Q7L3T8	475 aa	Known RBP	3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	C1QL2	Q7Z5L3	287 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	CAND1	Q86VP6	1230 aa	Known RBP	3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	ABRA	Q8N0Z2	381 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	OR56A3	Q8NH54	315 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	IL31RA	Q8NI17	732 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	PPP2R3C	Q969Q6	453 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	C5orf34	Q96MH7	638 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	PRR25	Q96S07	402 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	SMURF2	Q9HAU4	748 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	FLRT1	Q9NZU1	646 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	CPNE7	Q9UBL6	633 aa		3.77	□□□□□ -1.81
BBS4-215	ENST00000569001	LOC105371045	A0A1W2PR82	267 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	CTNND1	O60716	968 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	SCGB1D2	O95969	90 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	AGFG1	P52594	562 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	TUBA4A	P68366	448 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	PSG6	Q00889	435 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	MLC1	Q15049	377 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	MGAT5B	Q3V5L5	792 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	ANO6	Q4KMQ2	910 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	RNASE12	Q5GAN4	147 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	C3orf38	Q5JPI3	329 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	ODR4	Q5SWX8	454 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	ZNF425	Q6IV72	752 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	SLC18B1	Q6NT16	456 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	TRIM72	Q6ZMU5	477 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	ZNF804A	Q7Z570	1209 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	WDR53	Q7Z5U6	358 aa	Predicted RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	IZUMO1	Q8IYV9	350 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	OR6B3	Q8NGW1	331 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	DNAJB14	Q8TBM8	379 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	KBTBD7	Q8WVZ9	684 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	SOCS4	Q8WXH5	440 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	RUNDC1	Q96C34	613 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	NAF1	Q96HR8	494 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	RITA1	Q96K30	269 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	MOGAT1	Q96PD6	335 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	C17orf80	Q9BSJ5	609 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	DPCD	Q9BVM2	203 aa	Predicted RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	C1QTNF7	Q9BXJ2	289 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	KLHL13	Q9P2N7	655 aa		3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	DDX20	Q9UHI6	824 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-215	ENST00000569001	E2F8	A0AVK6	867 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	KCNU1	A8MYU2	1149 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	TBC1D4	O60343	1298 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	ONECUT2	O95948	504 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	LRPAP1	P30533	357 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	EPHB1	P54762	984 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SUMO3	P55854	103 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	HOXA4	Q00056	320 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SLC44A4	Q53GD3	710 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	CACHD1	Q5VU97	1274 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	APOA5	Q6Q788	366 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	NEK8	Q86SG6	692 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	CNGA4	Q8IV77	575 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	TERB1	Q8NA31	727 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	ABHD11	Q8NFV4	315 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	ZBTB45	Q96K62	511 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	MMS19	Q96T76	1030 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	C22orf23	Q9BZE7	217 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	CIPC	Q9C0C6	399 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SPRTN	Q9H040	489 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SACM1L	Q9NTJ5	587 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SH2B3	Q9UQQ2	575 aa		3.75	□□□□□ -1.81
BBS4-215	ENST00000569001	SMIM35	A0A1B0GVV1	85 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	CFAP69	A5D8W1	941 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001		H7C4K7	107 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	PPP6C	O00743	305 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	SRGAP2	O75044	1071 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	RASAL1	O95294	804 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	TH	P07101	528 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	RENBP	P51606	427 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	WNT3	P56703	355 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	SSBP2	P81877	361 aa	Predicted RBP	3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	CNN3	Q15417	329 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	PLEKHG6	Q3KR16	790 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	MAEA	Q7L5Y9	396 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	MICU3	Q86XE3	530 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	GAS2L3	Q86XJ1	694 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	RP9	Q8TA86	221 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	DAZAP1	Q96EP5	407 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	ASB2	Q96Q27	587 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	THAP7	Q9BT49	309 aa	Predicted RBP	3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	STK31	Q9BXU1	1019 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	DPH1	Q9BZG8	443 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	AS3MT	Q9HBK9	375 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	GABRQ	Q9UN88	632 aa		3.74	□□□□□ -1.81
BBS4-215	ENST00000569001	ZNF804B	A4D1E1	1349 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	CAPN8	A6NHC0	703 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	AGPS	O00116	658 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	MYO1F	O00160	1098 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	CES2	O00748	559 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	PHGDH	O43175	533 aa	Known RBP	3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	RFPL1	O75677	317 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	CYP2C9	P11712	490 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	HGF	P14210	728 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	BRAF	P15056	766 aa		3.73	□□□□□ -1.81
BBS4-215	ENST00000569001	EN2	P19622	333 aa	Predicted RBP	3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms