RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SPATA31D3P0C874 917 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 LAMP2P13473 410 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SREBF1P36956 1147 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 HK2P52789 917 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 NAPAP54920 295 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 STARD6P59095 220 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 ARHGAP8P85298 464 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 CSTF1Q05048 431 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 SCRN1Q12765 414 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 HTR4Q13639 388 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 NOMO2Q5JPE7 1267 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 TWF2Q6IBS0 349 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SPATA31D4Q6ZUB0 917 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 NIPA1Q7RTP0 329 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 PLA2G4DQ86XP0 818 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SMC5Q8IY18 1101 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 MB21D2Q8IYB1 491 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 CMASQ8NFW8 434 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 ATRIPQ8WXE1 791 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 RSPH1Q8WYR4 309 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SMG7Q92540 1137 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 SECISBP2LQ93073 1101 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 ZNF707Q96C28 371 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SGSM3Q96HU1 749 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 CHAMP1Q96JM3 812 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 ZNF577Q9BSK1 485 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 RTKNQ9BST9 563 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 CHST12Q9NRB3 414 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 MRPL17Q9NRX2 175 aaKnown RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 ERVK13-1Q9NX77 482 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-211ENST00000568770 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 STK39Q9UEW8 545 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 FBXO4Q9UKT5 387 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 MTF2Q9Y483 593 aaPredicted RBP6.3□□□□□ -1.4
CDH13-211ENST00000568770 PCDHGA2Q9Y5H1 932 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 PCDHA10Q9Y5I2 948 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 NUMBLQ9Y6R0 609 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 GREB1Q4ZG55 1949 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 TICRRQ7Z2Z1 1910 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 LAMA5O15230 3695 aa6.3□□□□□ -1.4
CDH13-211ENST00000568770 VWA8A3KMH1 1905 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SPAG17Q6Q759 2223 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SMCO2A6NFE2 343 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 NOTOA8MTQ0 251 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 ANHXE9PGG2 379 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 FGF10O15520 208 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 LAMTOR5O43504 91 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 PRC1O43663 620 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 GLUD1P00367 558 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SOD2P04179 222 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 ALDH2P05091 517 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 CALM1P0DP23 149 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 CALM2P0DP24 149 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 CALM3P0DP25 149 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TGM1P22735 817 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TRHRP34981 398 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 ADCY7P51828 1080 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 AK2P54819 239 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 GPC5P78333 572 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 NUCB1Q02818 461 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 IFRD2Q12894 506 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 DRP2Q13474 957 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TSSK4Q6SA08 328 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 CASC1Q6TDU7 716 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 PALB2Q86YC2 1186 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 SMAP1Q8IYB5 467 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 FANCBQ8NB91 859 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 ZBTB44Q8NCP5 570 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 AGBL5Q8NDL9 886 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 URGCPQ8TCY9 931 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 BORCS6Q96GS4 357 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 FAM167AQ96KS9 214 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 RPS6KC1Q96S38 1066 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 RPP25Q9BUL9 199 aaKnown RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 RHOBTB2Q9BYZ6 727 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 GCOM2Q9BZD3 368 aaPredicted RBP6.29□□□□□ -1.4
CDH13-211ENST00000568770 NT5C3AQ9H0P0 336 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TBC1D22BQ9NU19 505 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 DPP7Q9UHL4 492 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TCEAL9Q9UHQ7 104 aa6.29□□□□□ -1.4
CDH13-211ENST00000568770 TMEFF2Q9UIK5 374 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms