RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 AOPEPQ8N6M6 819 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 LRRC15Q8TF66 581 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 CD101Q93033 1021 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 GTPBP2Q9BX10 602 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 KCND2Q9NZV8 630 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
VPS9D1-207ENST00000568691 A0A087WV48 116 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 PPEF2O14830 753 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 KLRC4O43908 158 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 MED24O75448 989 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 CYP11B2P19099 503 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 PROZP22891 400 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 OPRD1P41143 372 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 ASIC1P78348 528 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 TRIP6Q15654 476 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 CRY1Q16526 586 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 SLC10A6Q3KNW5 377 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 FOXR2Q6PJQ5 311 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 CCDC33Q8N5R6 958 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 MAB21L3Q8N8X9 362 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 STKLD1Q8NE28 680 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 DEPTORQ8TB45 409 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 DNAAF2Q9NVR5 837 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 MMP17Q9ULZ9 603 aa12.81□□□□□ -0.36
VPS9D1-207ENST00000568691 PTPRBP23467 1997 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 OR6C75A6NL08 312 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CBFA2T3O75081 653 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TADA3O75528 432 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 FGF19O95750 216 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CFIP05156 583 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CDC25BP30305 580 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 SEC13P55735 322 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 PSMD2Q13200 908 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 NCAPHQ15003 741 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TXNDC8Q6A555 127 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 LPCAT2Q7L5N7 544 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 ZNF843Q8N446 348 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 GIPC2Q8TF65 315 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 ZBTB45Q96K62 511 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 SLC22A12Q96S37 553 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 UBL7Q96S82 380 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TARS2Q9BW92 718 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 SLC6A14Q9UN76 642 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 KIAA1024Q9UPX6 916 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 RAI2Q9Y5P3 530 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 WNT6Q9Y6F9 365 aa12.8□□□□□ -0.36
VPS9D1-207ENST00000568691 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 OPHN1O60890 802 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 SERPINF2P08697 491 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 CDC25CP30307 473 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 GUCY2FP51841 1108 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 YARSP54577 528 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 SLC12A3P55017 1021 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 SPAG1Q07617 926 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 EHHADHQ08426 723 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 MYBPC2Q14324 1141 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 MCM6Q14566 821 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 PDGFRLQ15198 375 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 ZBTB6Q15916 424 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 ZNF77Q15935 545 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 ECM1Q16610 540 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 EML3Q32P44 896 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 LYSMD4Q5XG99 296 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 PCSK4Q6UW60 755 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 HDDC3Q8N4P3 179 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 BLZF1Q9H2G9 400 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 LINC00597Q9H2U6 94 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 RWDD2AQ9UIY3 292 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 SPTA1P02549 2419 aa12.79□□□□□ -0.36
VPS9D1-207ENST00000568691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 MYMKA6NI61 221 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 SGK1O00141 431 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
VPS9D1-207ENST00000568691 PSMA7O14818 248 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms