RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MAGEA9P43362 315 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 RAP1GAPP47736 663 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 FMO5P49326 533 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 MXI1P50539 228 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 USP46P62068 366 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 CYP4F8P98187 520 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ARHGAP29Q52LW3 1261 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 CT47A1Q5JQC4 288 aaPredicted RBP8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 TXNDC8Q6A555 127 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 DENND5BQ6ZUT9 1274 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ACOT1Q86TX2 421 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC105Q8IYK2 499 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 NUP93Q8N1F7 819 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF276Q8N554 614 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ZMIZ2Q8NF64 920 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ST13P5Q8NFI4 369 aaPredicted RBP8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 PJA1Q8NG27 643 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 TATDN2Q93075 761 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ELMO3Q96BJ8 720 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 TWNKQ96RR1 684 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 SMOQ99835 787 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 UBXN6Q9BZV1 441 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 IMPG2Q9BZV3 1241 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 IRF2BPLQ9H1B7 796 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 CLSTN2Q9H4D0 955 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 TDP1Q9NUW8 608 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 RWDD2AQ9UIY3 292 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 CA14Q9ULX7 337 aa8.7□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF840PA6NDX5 716 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 CLDN5O00501 218 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 MAN2B1O00754 1011 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF263O14978 683 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 BEST1O76090 585 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 RTN3O95197 1032 aaPredicted RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 OAS1P00973 400 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 GDI1P31150 447 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 RPS9P46781 194 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 TUBP50607 506 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 PDE6CP51160 858 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 CDR1P51861 262 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 PTPN5P54829 565 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 SLC7A9P82251 487 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ZXDBP98169 803 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 CYP27A1Q02318 531 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 NHLH1Q02575 133 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 PAK1Q13153 545 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ARHGAP17Q68EM7 881 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF852Q6ZMS4 543 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 RBM43Q6ZSC3 357 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM35AQ86V20 835 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 IRF2BP1Q8IU81 584 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 SCN4BQ8IWT1 228 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 MAB21L3Q8N8X9 362 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 C12orf29Q8N999 325 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 MLKLQ8NB16 471 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 DTWD2Q8NBA8 298 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 BPIFB1Q8TDL5 484 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 MRPS31Q92665 395 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 SMARCD1Q96GM5 515 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 IPO9Q96P70 1041 aaKnown RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 SLC22A12Q96S37 553 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 NT5C1AQ9BXI3 368 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 MFSD1Q9H3U5 465 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 BRD9Q9H8M2 597 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 LTB4R2Q9NPC1 389 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 DMAP1Q9NPF5 467 aaPredicted RBP8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 HEBP1Q9NRV9 189 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 HMGXB4Q9UGU5 601 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ARHGAP26Q9UNA1 814 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 SIT1Q9Y3P8 196 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 ATP8B3O60423 1300 aa8.69□□□□□ -1.02
HDGFL3-205ENST00000568129 PROB1E7EW31 1015 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 BIN1O00499 593 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 USP17L7P0C7H9 530 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 ANXA13P27216 316 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 YWHAQP27348 245 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 RAD23BP54727 409 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 TAF10Q12962 218 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 USP4Q13107 963 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 GRM2Q14416 872 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF77Q15935 545 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 TAF12Q16514 161 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CAMK4Q16566 473 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 WDR44Q5JSH3 913 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 CLEC20AQ6ZU45 233 aa8.68□□□□□ -1.02
HDGFL3-205ENST00000568129 RALGPS2Q86X27 583 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms