RNA–Protein interactions for RNA: ENST00000568059.1

NEIL1-218, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 4

Gene NEIL1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-218ENST00000568059 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.15■□□□□ 0.34
NEIL1-218ENST00000568059 KRT82Q9NSB4 513 aa17.15■□□□□ 0.34
NEIL1-218ENST00000568059 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
NEIL1-218ENST00000568059 PROB1E7EW31 1015 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 GFRA3O60609 400 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 CTHP32929 405 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 PDE6CP51160 858 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 MLLT6P55198 1093 aaPredicted RBP17.14■□□□□ 0.33
NEIL1-218ENST00000568059 USP46P62068 366 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TNK2Q07912 1038 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
NEIL1-218ENST00000568059 ORC1Q13415 861 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 STIM1Q13586 685 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 KRT39Q6A163 491 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
NEIL1-218ENST00000568059 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TTC16Q8NEE8 873 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 SMARCD1Q96GM5 515 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TTLL2Q9BWV7 592 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 NIF3L1Q9GZT8 377 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TMEM30AQ9NV96 361 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 TRPM5Q9NZQ8 1165 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 MYO16Q9Y6X6 1858 aa17.14■□□□□ 0.33
NEIL1-218ENST00000568059 C2orf78A6NCI8 922 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 PSMA7O14818 248 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 SLC16A3O15427 465 aaKnown RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 STX10O60499 249 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 GTF2H1P32780 548 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 NDST1P52848 882 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 USP4Q13107 963 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 MTF1Q14872 753 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 ITPRIPL2Q3MIP1 535 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 DCAF17Q5H9S7 520 aaPredicted RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 UNC93AQ86WB7 457 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 RALGPS2Q86X27 583 aaPredicted RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 ARL14EPQ8N8R7 260 aaPredicted RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 NKD2Q969F2 451 aaPredicted RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 SLITRK1Q96PX8 696 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 IER2Q9BTL4 223 aa17.13■□□□□ 0.33
NEIL1-218ENST00000568059 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
NEIL1-218ENST00000568059 MYH10P35580 1976 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 TRIM49BA6NDI0 452 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 SP9P0CG40 484 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 CCDC130P13994 396 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 PPP1R2P41236 205 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 PPP3CCP48454 512 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
NEIL1-218ENST00000568059 FKBP3Q00688 224 aaKnown RBP17.12■□□□□ 0.33
NEIL1-218ENST00000568059 INCA1Q0VD86 236 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 LRRC32Q14392 662 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 ZNF77Q15935 545 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
NEIL1-218ENST00000568059 ADSSL1Q8N142 457 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 RIN3Q8TB24 985 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 CHRDQ9H2X0 955 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 CYP3A43Q9HB55 503 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 APOBEC3GQ9HC16 384 aaKnown RBP17.12■□□□□ 0.33
NEIL1-218ENST00000568059 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 MAN1B1Q9UKM7 699 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
NEIL1-218ENST00000568059 PRR23AA6NEV1 266 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 AP1G2O75843 785 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
NEIL1-218ENST00000568059 ABL1P00519 1130 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 PFKLP17858 780 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 HDCP19113 662 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 CD58P19256 250 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 SLC5A3P53794 718 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 TAF10Q12962 218 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 FZD5Q13467 585 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 RUNX3Q13761 415 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 PDGFRLQ15198 375 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 ZC3H3Q8IXZ2 948 aaKnown RBP17.11■□□□□ 0.33
NEIL1-218ENST00000568059 MAML2Q8IZL2 1156 aaPredicted RBP17.11■□□□□ 0.33
NEIL1-218ENST00000568059 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 NUP93Q8N1F7 819 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 FBXL13Q8NEE6 735 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 SLC2A14Q8TDB8 520 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 FBXO32Q969P5 355 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 KCNK16Q96T55 309 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 EBF3Q9H4W6 596 aa17.11■□□□□ 0.33
NEIL1-218ENST00000568059 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms