RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ZNF852Q6ZMS4 543 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 PAQR9Q6ZVX9 377 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 YAF2Q8IY57 180 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 MAML2Q8IZL2 1156 aaPredicted RBP26.78■■□□□ 1.88
FANCA-228ENST00000567943 TRIML1Q8N9V2 468 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 BPIFB1Q8TDL5 484 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 DUSP9Q99956 384 aaKnown RBP26.78■■□□□ 1.88
FANCA-228ENST00000567943 HMGXB4Q9UGU5 601 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 ZMYM5Q9UJ78 669 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 PIAS3Q9Y6X2 628 aa26.78■■□□□ 1.88
FANCA-228ENST00000567943 BICDL2A1A5D9 508 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 SOBPA7XYQ1 873 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 DPYSL4O14531 572 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 STX17P56962 302 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 NOP14P78316 857 aaKnown RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 C1orf210Q8IVY1 113 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 CELF5Q8N6W0 485 aaKnown RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 MRPS31Q92665 395 aaKnown RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 C8orf48Q96LL4 319 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 CEP63Q96MT8 703 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 APOBEC3GQ9HC16 384 aaKnown RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 ARMCX3Q9UH62 379 aaPredicted RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 FANCMQ8IYD8 2048 aa26.77■■□□□ 1.88
FANCA-228ENST00000567943 HELZP42694 1942 aaKnown RBP26.77■■□□□ 1.88
FANCA-228ENST00000567943 FRYLO94915 3013 aa26.76■■□□□ 1.88
FANCA-228ENST00000567943 CFAP54Q96N23 3096 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 NBL1P41271 181 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 SOX9P48436 509 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 ARHGAP29Q52LW3 1261 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 DENND5BQ6ZUT9 1274 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 CCDC150Q8NCX0 1101 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 CEP295NLQ96MC4 621 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 CYP2S1Q96SQ9 504 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 NELL2Q99435 816 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 TTLL2Q9BWV7 592 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 CLSTN2Q9H4D0 955 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 LMBRD1Q9NUN5 540 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 GTSE1Q9NYZ3 720 aa26.76■■□□□ 1.87
FANCA-228ENST00000567943 PROB1E7EW31 1015 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 AVPR1AP37288 418 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 MLLT6P55198 1093 aaPredicted RBP26.75■■□□□ 1.87
FANCA-228ENST00000567943 TNK2Q07912 1038 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 PAK1Q13153 545 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 ORC1Q13415 861 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 WDR44Q5JSH3 913 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 FOXR2Q6PJQ5 311 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 FILIP1Q7Z7B0 1213 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 FBXL13Q8NEE6 735 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 SEMA4DQ92854 862 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 TNIP3Q96KP6 325 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 GBP4Q96PP9 640 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 BCO2Q9BYV7 579 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 ELOVL4Q9GZR5 314 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 METTL14Q9HCE5 456 aaKnown RBP26.75■■□□□ 1.87
FANCA-228ENST00000567943 TDP1Q9NUW8 608 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 GCNT4Q9P109 453 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 MYH10P35580 1976 aa26.75■■□□□ 1.87
FANCA-228ENST00000567943 C2orf78A6NCI8 922 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 MAN2B1O00754 1011 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 TRIM66O15016 1216 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 NDST1P52848 882 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 CCDC40Q4G0X9 1142 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 CBWD6Q4V339 395 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 CBWD3Q5JTY5 395 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 CBWD5Q5RIA9 395 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 ACOT1Q86TX2 421 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 FUKQ8N0W3 1084 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 TTC8Q8TAM2 541 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 KCNK16Q96T55 309 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 FAM83CQ9BQN1 747 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 NIF3L1Q9GZT8 377 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 RAB20Q9NX57 234 aa26.74■■□□□ 1.87
FANCA-228ENST00000567943 NDRG2Q9UN36 371 aaKnown RBP26.74■■□□□ 1.87
FANCA-228ENST00000567943 ANXA13P27216 316 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 ZNF268Q14587 947 aaPredicted RBP26.73■■□□□ 1.87
FANCA-228ENST00000567943 TXNDC11Q6PKC3 985 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 FRMD5Q7Z6J6 570 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 CRYBG2Q8N1P7 616 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 CSGALNACT1Q8TDX6 532 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 FAM3CQ92520 227 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 SLC35C1Q96A29 364 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 TWNKQ96RR1 684 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 TRPC7Q9HCX4 862 aa26.73■■□□□ 1.87
FANCA-228ENST00000567943 MRPS17Q9Y2R5 130 aaKnown RBP26.73■■□□□ 1.87
FANCA-228ENST00000567943 OTOL1A6NHN0 477 aaPredicted RBP26.72■■□□□ 1.87
FANCA-228ENST00000567943 RPS9P46781 194 aaKnown RBP26.72■■□□□ 1.87
FANCA-228ENST00000567943 FAM35AQ86V20 835 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 UNC93AQ86WB7 457 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 ARL14EPQ8N8R7 260 aaPredicted RBP26.72■■□□□ 1.87
FANCA-228ENST00000567943 MED10Q9BTT4 135 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 NUP62CLQ9H1M0 184 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 CYP3A43Q9HB55 503 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 HPS4Q9NQG7 708 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 GKN1Q9NS71 199 aa26.72■■□□□ 1.87
FANCA-228ENST00000567943 CCDC130P13994 396 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 CTHP32929 405 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 ZXDBP98169 803 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 PLCB2Q00722 1185 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 INCA1Q0VD86 236 aa26.71■■□□□ 1.87
FANCA-228ENST00000567943 TRIM68Q6AZZ1 485 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms