RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 TRMT2BQ96GJ1 504 aaKnown RBP16.04■□□□□ 0.16
COMMD4-219ENST00000567399 SLITRK1Q96PX8 696 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 SMOQ99835 787 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-219ENST00000567399 LRRC3Q9BY71 257 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 FAM207AQ9NSI2 230 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-219ENST00000567399 TRPM5Q9NZQ8 1165 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 EPS15L1Q9UBC2 864 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 TSPAN16Q9UKR8 245 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 C2orf16Q68DN1 1984 aa16.04■□□□□ 0.16
COMMD4-219ENST00000567399 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 REV3LO60673 3130 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 THAP12O43422 761 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 BEST1O76090 585 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 RFX1P22670 979 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
COMMD4-219ENST00000567399 GNA15P30679 374 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 POLR2FP61218 127 aaKnown RBP16.03■□□□□ 0.16
COMMD4-219ENST00000567399 CYP4F8P98187 520 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 PTK2Q05397 1052 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 CLEC20AQ6ZU45 233 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 GAREM2Q75VX8 874 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 MTSS1LQ765P7 747 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 ST13P5Q8NFI4 369 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-219ENST00000567399 UBA3Q8TBC4 463 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 FBXO32Q969P5 355 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 FBXO44Q9H4M3 255 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 CSNK1G1Q9HCP0 422 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 TRPC7Q9HCX4 862 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 SIX2Q9NPC8 291 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 COL6A3P12111 3177 aa16.03■□□□□ 0.16
COMMD4-219ENST00000567399 TNFRSF10AO00220 468 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 DPYSL4O14531 572 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 F11P03951 625 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 ASGR2P07307 311 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 UCHL3P15374 230 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 DDX6P26196 483 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD4-219ENST00000567399 KLK7P49862 253 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 SLC5A3P53794 718 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 BCAT1P54687 386 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 TAF10Q12962 218 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 DRAP1Q14919 205 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-219ENST00000567399 CNGA2Q16280 664 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 MAB21L3Q8N8X9 362 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-219ENST00000567399 MYRFLQ96LU7 910 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 SPAG5Q96R06 1193 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 TASP1Q9H6P5 420 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 CD320Q9NPF0 282 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 TMEM30AQ9NV96 361 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 COMMD8Q9NX08 183 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 IGSF9Q9P2J2 1179 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 FHOD1Q9Y613 1164 aa16.02■□□□□ 0.16
COMMD4-219ENST00000567399 M0QYV0 167 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 FOXN3O00409 490 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-219ENST00000567399 CYP26A1O43174 497 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 MOSPD3O75425 235 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 CALCAP01258 141 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 AVPR1AP37288 418 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 PPP3CCP48454 512 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 UBASH3AP57075 661 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 BPIFB4P59827 614 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 USP46P62068 366 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 FANCCQ00597 558 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 BST2Q10589 180 aaKnown RBP16.01■□□□□ 0.15
COMMD4-219ENST00000567399 LCLAT1Q6UWP7 414 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 PDZD8Q8NEN9 1154 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 SCAMP5Q8TAC9 235 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 SHC3Q92529 594 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 NXPE3Q969Y0 559 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 ZSWIM3Q96MP5 696 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 STK33Q9BYT3 514 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 IL21Q9HBE4 155 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 NLRC4Q9NPP4 1024 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
COMMD4-219ENST00000567399 CHORDC1Q9UHD1 332 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-219ENST00000567399 ZMYM5Q9UJ78 669 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
COMMD4-219ENST00000567399 TRAV19A0A0A6YYK7 116 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 O00370 1275 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 DLL1O00548 723 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 TEX33O43247 280 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 TPM3P06753 285 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 SETSIPP0DME0 302 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 KRT9P35527 623 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 PDE6CP51160 858 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 ZNF132P52740 706 aa16■□□□□ 0.15
COMMD4-219ENST00000567399 ZNF445P59923 1031 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms