RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 BDP1A6H8Y1 2624 aa27.68■■■□□ 2.02
NME3-209ENST00000566600 MOSPD3O75425 235 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 ZNF132P52740 706 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 MAP3K7CLP57077 242 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 APBA1Q02410 837 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 UBXN1Q04323 297 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 STILQ15468 1287 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 ARHGAP44Q17R89 818 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 FILIP1LQ4L180 1135 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 KLHDC7AQ5VTJ3 777 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 CLEC20AQ6ZU45 233 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 GAREM2Q75VX8 874 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 APTXQ7Z2E3 356 aaKnown RBP27.67■■■□□ 2.02
NME3-209ENST00000566600 LUZP1Q86V48 1076 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 RNF135Q8IUD6 432 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 NXPE3Q969Y0 559 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 SMOQ99835 787 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 TTLL2Q9BWV7 592 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 LSM14BQ9BX40 385 aaKnown RBP27.67■■■□□ 2.02
NME3-209ENST00000566600 TSPY26PQ9H489 355 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 PNPLA8Q9NP80 782 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 COMMD8Q9NX08 183 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 IGSF9Q9P2J2 1179 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 HESX1Q9UBX0 185 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 LIMD1Q9UGP4 676 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 DAAM1Q9Y4D1 1078 aa27.67■■■□□ 2.02
NME3-209ENST00000566600 NPR3P17342 541 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 TEAD2Q15562 447 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 MTSS1LQ765P7 747 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 ANKRD52Q8NB46 1076 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 STKLD1Q8NE28 680 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 SHC3Q92529 594 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 MCRS1Q96EZ8 462 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 DOCK8Q8NF50 2099 aa27.66■■■□□ 2.02
NME3-209ENST00000566600 SOBPA7XYQ1 873 aa27.65■■■□□ 2.02
NME3-209ENST00000566600 RNF225M0QZC1 329 aaPredicted RBP27.65■■■□□ 2.02
NME3-209ENST00000566600 F11P03951 625 aa27.65■■■□□ 2.02
NME3-209ENST00000566600 DDX6P26196 483 aaKnown RBP eCLIP27.65■■■□□ 2.02
NME3-209ENST00000566600 DPY19L2P1Q6NXN4 242 aa27.65■■■□□ 2.02
NME3-209ENST00000566600 ZMIZ2Q8NF64 920 aa27.65■■■□□ 2.02
NME3-209ENST00000566600 MRPS31Q92665 395 aaKnown RBP27.65■■■□□ 2.02
NME3-209ENST00000566600 SLITRK6Q9H5Y7 841 aa27.65■■■□□ 2.02
NME3-209ENST00000566600 BEST1O76090 585 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 UCHL3P15374 230 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 GJA1P17302 382 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 PPP3CCP48454 512 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 GOLGA7BQ2TAP0 167 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 SLITRK1Q96PX8 696 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 ERGIC2Q96RQ1 377 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 UBXN6Q9BZV1 441 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 TSPAN16Q9UKR8 245 aa27.64■■■□□ 2.02
NME3-209ENST00000566600 MYH10P35580 1976 aa27.64■■■□□ 2.01
NME3-209ENST00000566600 GREB1Q4ZG55 1949 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 TNFRSF10AO00220 468 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 O00370 1275 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 TNFRSF10BO14763 440 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 YWHAQP27348 245 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 USP8P40818 1118 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 SLC5A3P53794 718 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 BCAT1P54687 386 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 USP46P62068 366 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 SYCP1Q15431 976 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 CNGA2Q16280 664 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 GPR158Q5T848 1215 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 LCLAT1Q6UWP7 414 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 PCMTD1Q96MG8 357 aaPredicted RBP27.63■■■□□ 2.01
NME3-209ENST00000566600 FBXO44Q9H4M3 255 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 TASP1Q9H6P5 420 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 SIK3Q9Y2K2 1263 aa27.63■■■□□ 2.01
NME3-209ENST00000566600 ANHXE9PGG2 379 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 SERPINC1P01008 464 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 RAPGEF1Q13905 1077 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 TMEM150AQ86TG1 271 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 PDZD8Q8NEN9 1154 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 OVCA2Q8WZ82 227 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 TFAP2BQ92481 460 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 KCNK12Q9HB15 430 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 RTN4Q9NQC3 1192 aaKnown RBP27.62■■■□□ 2.01
NME3-209ENST00000566600 IL37Q9NZH6 218 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 TRPM5Q9NZQ8 1165 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 FHOD1Q9Y613 1164 aa27.62■■■□□ 2.01
NME3-209ENST00000566600 VCANP13611 3396 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 NRG2O14511 850 aaPredicted RBP27.61■■■□□ 2.01
NME3-209ENST00000566600 MED7O43513 233 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 ZNF445P59923 1031 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 CYP4F8P98187 520 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 BST2Q10589 180 aaKnown RBP27.61■■■□□ 2.01
NME3-209ENST00000566600 IFRD2Q12894 506 aaPredicted RBP27.61■■■□□ 2.01
NME3-209ENST00000566600 HTR4Q13639 388 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 NEK11Q8NG66 645 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 SMARCD2Q92925 531 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 NAA15Q9BXJ9 866 aaKnown RBP27.61■■■□□ 2.01
NME3-209ENST00000566600 STK33Q9BYT3 514 aa27.61■■■□□ 2.01
NME3-209ENST00000566600 FAM207AQ9NSI2 230 aaPredicted RBP27.61■■■□□ 2.01
NME3-209ENST00000566600 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.61■■■□□ 2.01
NME3-209ENST00000566600 SETSIPP0DME0 302 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 BRD2P25440 801 aaKnown RBP27.6■■■□□ 2.01
NME3-209ENST00000566600 WEE1P30291 646 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 GNA15P30679 374 aa27.6■■■□□ 2.01
NME3-209ENST00000566600 BPIFB4P59827 614 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms