RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ATP6V1B1P15313 513 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 TPH1P17752 444 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ADCY8P40145 1251 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 NNMTP40261 264 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 HADHAP40939 763 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 GLRBP48167 497 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 SLC11A2P49281 568 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ANTXR2P58335 489 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ATP8B2P98198 1209 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 MAMLD1Q13495 774 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 MTM1Q13496 603 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 DCTN2Q13561 401 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 SCARB2Q14108 478 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 KCNAB1Q14722 419 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 NFIL3Q16649 462 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ZDHHC24Q6UX98 284 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 BBS12Q6ZW61 710 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 H1FNTQ75WM6 255 aaPredicted RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 BMP8AQ7Z5Y6 402 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 RAB11FIP4Q86YS3 637 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 RASGRP3Q8IV61 690 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 CARNMT1Q8N4J0 409 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 AVL9Q8NBF6 648 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 PDZD8Q8NEN9 1154 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 OR7D4Q8NG98 312 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 TTLL11Q8NHH1 800 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 SNX33Q8WV41 574 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 CCDC47Q96A33 483 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 FAM120BQ96EK7 910 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 APOPT1Q96IL0 206 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 NOX5Q96PH1 765 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 GPR20Q99678 358 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 XPO4Q9C0E2 1151 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 USP44Q9H0E7 712 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 XYLT2Q9H1B5 865 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 NELFAQ9H3P2 528 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 PRDM13Q9H4Q3 707 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 BCAS3Q9H6U6 928 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ARGLU1Q9NWB6 273 aaPredicted RBP3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 GALNT8Q9NY28 637 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 MTRRQ9UBK8 725 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF112Q9UJU3 913 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 ACSL6Q9UKU0 697 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 TMCC3Q9ULS5 477 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 DERAQ9Y315 318 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 PAXBP1Q9Y5B6 917 aa3.67□□□□□ -1.82
HERPUD1-211ENST00000566550 A0A1W2PR48 441 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 FITM1A5D6W6 292 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 VWA3AA6NCI4 1184 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 OTOL1A6NHN0 477 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF839A8K0R7 811 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 A8MV72 311 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 C19orf81C9J6K1 198 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 J3KTA2 159 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PEX12O00623 359 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 N4BP3O15049 544 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 KIAA0391O15091 583 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ERAL1O75616 437 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TMEM63AO94886 807 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 GLI4P10075 376 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RAP2AP10114 183 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CKBP12277 381 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 SERPINA4P29622 427 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ACSL1P33121 698 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RGS2P41220 211 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ALDH1A3P47895 512 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF131P52739 623 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ERVFC1P60507 584 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CTXN1P60606 82 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RPS3AP61247 264 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TMF1P82094 1093 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CD83Q01151 205 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 MEF2AQ02078 507 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PLP2Q04941 152 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 SEC23BQ15437 767 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF827Q17R98 1081 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 BMP2KLQ5H9B9 411 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RALGPS1Q5JS13 557 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 UBXN11Q5T124 520 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 EMC10Q5UCC4 262 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CACHD1Q5VU97 1274 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 LRCH2Q5VUJ6 765 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 VASNQ6EMK4 673 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 GALNT18Q6P9A2 607 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 KIAA0408Q6ZU52 694 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 IKBIPQ70UQ0 350 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RTL10Q7L3V2 364 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 OTOP2Q7RTS6 562 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 SPPL2CQ8IUH8 684 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CCDC170Q8IYT3 715 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PIK3C3Q8NEB9 887 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TOR1AIP2Q8NFQ8 470 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 METTL6Q8TCB7 284 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 SMCR8Q8TEV9 937 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 KIF1BPQ96EK5 621 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 CYFIP2Q96F07 1278 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms