RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 TTI2Q6NXR4 508 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 NUP93Q8N1F7 819 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 C12orf29Q8N999 325 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 PJA1Q8NG27 643 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 SMARCD1Q96GM5 515 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 ZFYVE19Q96K21 471 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 NELL2Q99435 816 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 NT5C1AQ9BXI3 368 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 IRF2BPLQ9H1B7 796 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 TRPV5Q9NQA5 729 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 HMGXB4Q9UGU5 601 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 MRPS17Q9Y2R5 130 aaKnown RBP20.52■□□□□ 0.88
CCDC113-204ENST00000566498 DENND4CQ5VZ89 1909 aa20.52■□□□□ 0.88
CCDC113-204ENST00000566498 AP1G2O75843 785 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 USP17L7P0C7H9 530 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 CCDC130P13994 396 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 HDCP19113 662 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 TCF15Q12870 199 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 PAK1Q13153 545 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 CBWD6Q4V339 395 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 CBWD3Q5JTY5 395 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 CBWD5Q5RIA9 395 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 PAQR9Q6ZVX9 377 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 FAM35AQ86V20 835 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 FUKQ8N0W3 1084 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 TRIML1Q8N9V2 468 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 TTC8Q8TAM2 541 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 SLC2A14Q8TDB8 520 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 ATOH1Q92858 354 aaPredicted RBP20.51■□□□□ 0.87
CCDC113-204ENST00000566498 USP13Q92995 863 aaPredicted RBP20.51■□□□□ 0.87
CCDC113-204ENST00000566498 TATDN2Q93075 761 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 DDX23Q9BUQ8 820 aaKnown RBP20.51■□□□□ 0.87
CCDC113-204ENST00000566498 GKN1Q9NS71 199 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 FAM49BQ9NUQ9 324 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 TMEM30AQ9NV96 361 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 CCL26Q9Y258 94 aa20.51■□□□□ 0.87
CCDC113-204ENST00000566498 MTF2Q9Y483 593 aaPredicted RBP20.51■□□□□ 0.87
CCDC113-204ENST00000566498 MAN2B1O00754 1011 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 NCAM2O15394 837 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 TADA3O75528 432 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 CKMP06732 381 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 YWHAQP27348 245 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 PPP3CCP48454 512 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 NHLH1Q02575 133 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 INCA1Q0VD86 236 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 TAF10Q12962 218 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 ZNF394Q53GI3 561 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 CC2D1AQ6P1N0 951 aaPredicted RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 ARL14EPQ8N8R7 260 aaPredicted RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 SLC35C1Q96A29 364 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 CYFIP2Q96F07 1278 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 HEXIM2Q96MH2 286 aaKnown RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 SLITRK1Q96PX8 696 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 LTB4R2Q9NPC1 389 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 DMAP1Q9NPF5 467 aaPredicted RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 KRT82Q9NSB4 513 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 NDRG2Q9UN36 371 aaKnown RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 PIAS3Q9Y6X2 628 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 PTPRDP23468 1912 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 GREB1Q4ZG55 1949 aa20.5■□□□□ 0.87
CCDC113-204ENST00000566498 NUP210Q8TEM1 1887 aaPredicted RBP20.5■□□□□ 0.87
CCDC113-204ENST00000566498 C2orf78A6NCI8 922 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 RTN3O95197 1032 aaPredicted RBP20.49■□□□□ 0.87
CCDC113-204ENST00000566498 FGFR1OPO95684 399 aaKnown RBP20.49■□□□□ 0.87
CCDC113-204ENST00000566498 ADORA2BP29275 332 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 CREBRFQ8IUR6 639 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 FAM3CQ92520 227 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 FAXDC2Q96IV6 333 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 TWNKQ96RR1 684 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 SLC22A12Q96S37 553 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 TTLL2Q9BWV7 592 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 CHORDC1Q9UHD1 332 aaPredicted RBP20.49■□□□□ 0.87
CCDC113-204ENST00000566498 TICRRQ7Z2Z1 1910 aa20.49■□□□□ 0.87
CCDC113-204ENST00000566498 MYH10P35580 1976 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 CILPO75339 1184 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 GNA14O95837 355 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 GLULP15104 373 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 PDE6CP51160 858 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 MAP3K7CLP57077 242 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 LRMPQ12912 555 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 FOXR2Q6PJQ5 311 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 TTC39CQ8N584 583 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 SCAMP5Q8TAC9 235 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 WHAMMQ8TF30 809 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 HNRNPABQ99729 332 aaKnown RBP20.48■□□□□ 0.87
CCDC113-204ENST00000566498 OSBPL6Q9BZF3 934 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 KIF9Q9HAQ2 790 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 CISHQ9NSE2 258 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 GTSE1Q9NYZ3 720 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 COQ4Q9Y3A0 265 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 COL4A3Q01955 1670 aa20.48■□□□□ 0.87
CCDC113-204ENST00000566498 OBSL1O75147 1896 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 MUC6Q6W4X9 2439 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 ZNF840PA6NDX5 716 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 ARNTLO00327 626 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 BEST1O76090 585 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms