RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 CAMKK1Q8N5S9 505 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 FSIP1Q8NA03 581 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 ZNF516Q92618 1163 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 LOXL4Q96JB6 756 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 MMS19Q96T76 1030 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 C7orf25Q9BPX7 421 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 LRRC27Q9C0I9 530 aa20.1■□□□□ 0.81
ABCA3-204ENST00000566200 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
ABCA3-204ENST00000566200 AKAP3O75969 853 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 CCDC192P0DO97 292 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 DLATP10515 647 aaKnown RBP20.09■□□□□ 0.81
ABCA3-204ENST00000566200 GRIK1P39086 918 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 OPRD1P41143 372 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 CYP2J2P51589 502 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 CYP24A1Q07973 514 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 MAPRE1Q15691 268 aaKnown RBP20.09■□□□□ 0.81
ABCA3-204ENST00000566200 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 PLA2G2CQ5R387 149 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 SYT13Q7L8C5 426 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 ZC3H10Q96K80 434 aaKnown RBP20.09■□□□□ 0.81
ABCA3-204ENST00000566200 CEP295NLQ96MC4 621 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 CGRRF1Q99675 332 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 RNF38Q9H0F5 515 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 DPEP3Q9H4B8 488 aa20.09■□□□□ 0.81
ABCA3-204ENST00000566200 SDK1Q7Z5N4 2213 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 ZNF840PA6NDX5 716 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 F8VP50 259 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 FOXD2O60548 495 aaPredicted RBP20.08■□□□□ 0.81
ABCA3-204ENST00000566200 CUTAO60888 179 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 TACC1O75410 805 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 YEATS4O95619 227 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 OLFM2O95897 454 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 ZNF806P0C7X5 589 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 GNL1P36915 607 aaPredicted RBP20.08■□□□□ 0.81
ABCA3-204ENST00000566200 NOP14P78316 857 aaKnown RBP20.08■□□□□ 0.81
ABCA3-204ENST00000566200 DMC1Q14565 340 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 IQUBQ8NA54 791 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 CCDC127Q96BQ5 260 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 C8orf48Q96LL4 319 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 BACH2Q9BYV9 841 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 XYLT2Q9H1B5 865 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 SMOC1Q9H4F8 434 aa20.08■□□□□ 0.81
ABCA3-204ENST00000566200 UBE4BO95155 1302 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 LEFTY2O00292 366 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 TM4SF5O14894 197 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 DCLK1O15075 740 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 TNNI1P19237 187 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 AMPD3Q01432 767 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 WDR72Q3MJ13 1102 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 PLK5Q496M5 336 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 UNC13DQ70J99 1090 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 XXYLT1Q8NBI6 393 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 PLEKHO2Q8TD55 490 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 ZNF396Q96N95 335 aaPredicted RBP20.07■□□□□ 0.8
ABCA3-204ENST00000566200 ZNF518BQ9C0D4 1074 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 DUSP15Q9H1R2 295 aaPredicted RBP20.07■□□□□ 0.8
ABCA3-204ENST00000566200 BLZF1Q9H2G9 400 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 TRPM5Q9NZQ8 1165 aa20.07■□□□□ 0.8
ABCA3-204ENST00000566200 K7EQS6 105 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 CLDN5O00501 218 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 TRIM66O15016 1216 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 OAS1P00973 400 aaKnown RBP20.06■□□□□ 0.8
ABCA3-204ENST00000566200 PFKLP17858 780 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 PTPN1P18031 435 aaKnown RBP20.06■□□□□ 0.8
ABCA3-204ENST00000566200 ANXA13P27216 316 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 LIMK1P53667 647 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 MYL6P60660 151 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 SLC7A9P82251 487 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 BMT2Q1RMZ1 405 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 AASDHQ4L235 1098 aaPredicted RBP20.06■□□□□ 0.8
ABCA3-204ENST00000566200 FOXD4L5Q5VV16 416 aaPredicted RBP20.06■□□□□ 0.8
ABCA3-204ENST00000566200 HS2ST1Q7LGA3 356 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 OR6B3Q8NGW1 331 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 FOXD4L4Q8WXT5 416 aaPredicted RBP20.06■□□□□ 0.8
ABCA3-204ENST00000566200 FNBP1Q96RU3 617 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 B3GNT5Q9BYG0 378 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 SNX25Q9H3E2 840 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 EBF1Q9UH73 591 aa20.06■□□□□ 0.8
ABCA3-204ENST00000566200 SCAMP3O14828 347 aaKnown RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 POLR2DO15514 142 aaKnown RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 NFATC1O95644 943 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 APBB3O95704 486 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 STAU1O95793 577 aaKnown RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 CYP17A1P05093 508 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 FAM163BP0C2L3 166 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 CHRM1P11229 460 aaPredicted RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 MPLP40238 635 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 CASP4P49662 377 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 PDE6CP51160 858 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 SNRPFP62306 86 aaKnown RBP20.05■□□□□ 0.8
ABCA3-204ENST00000566200 MESP2Q0VG99 397 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 NR1H3Q13133 447 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 PSMD2Q13200 908 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 FILIP1Q7Z7B0 1213 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 C12orf56Q8IXR9 622 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 USP33Q8TEY7 942 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 EXOC4Q96A65 974 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 ACDQ96AP0 544 aa20.05■□□□□ 0.8
ABCA3-204ENST00000566200 SLC39A2Q9NP94 309 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms