RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CACTINQ8WUQ7 758 aaKnown RBP13.68□□□□□ -0.22
RNF40-208ENST00000565995 PIGKQ92643 395 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 KIF2CQ99661 725 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 NUSAP1Q9BXS6 441 aaKnown RBP13.68□□□□□ -0.22
RNF40-208ENST00000565995 SLC32A1Q9H598 525 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 TMEM74BQ9NUR3 256 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 ANTXRLA6NF34 631 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 OLFM2O95897 454 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 ITGB3P05106 788 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 DDIT3P35638 169 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 PPP3CCP48454 512 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 WNT7BP56706 349 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 SLC7A9P82251 487 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 KCNB1Q14721 858 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 RABEP1Q15276 862 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 MAP7D1Q3KQU3 841 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 TRIM61Q5EBN2 209 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 LPCAT2Q7L5N7 544 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 OSTM1Q86WC4 334 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 IL17RCQ8NAC3 791 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 ZCCHC14Q8WYQ9 949 aaKnown RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 MBD1Q9UIS9 605 aaPredicted RBP13.67□□□□□ -0.22
RNF40-208ENST00000565995 PILRBQ9UKJ0 227 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
RNF40-208ENST00000565995 ACACAQ13085 2346 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 TP53BP1Q12888 1972 aaPredicted RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 MYMKA6NI61 221 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 H0Y626 953 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 LEFTY2O00292 366 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 TRIM16O95361 564 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 CYP17A1P05093 508 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 ENGP17813 658 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 PLCG1P19174 1290 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 PCSK1P29120 753 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 LONP1P36776 959 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 KIR2DL1P43626 348 aaPredicted RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 RING1Q06587 406 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 SOWAHAQ2M3V2 549 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 UAP1L1Q3KQV9 507 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 SCARA3Q6AZY7 606 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 CCDC33Q8N5R6 958 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 WHAMMQ8TF30 809 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 LARP4BQ92615 738 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 PNKPQ96T60 521 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 IKZF4Q9H2S9 585 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
RNF40-208ENST00000565995 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
RNF40-208ENST00000565995 SGK1O00141 431 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 SLC9A3R1O14745 358 aaPredicted RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 GARTP22102 1010 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 PTGER3P43115 390 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 SEC13P55735 322 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 NOP14P78316 857 aaKnown RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 DHCR24Q15392 516 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 EOGTQ5NDL2 527 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 MCTP1Q6DN14 999 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 PHTF2Q8N3S3 785 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 ALLCQ8N6M5 410 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 ZSWIM2Q8NEG5 633 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 CEP76Q8TAP6 659 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 SPACA7Q96KW9 195 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 POLMQ9NP87 494 aaPredicted RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 EHD2Q9NZN4 543 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 TRPM5Q9NZQ8 1165 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
RNF40-208ENST00000565995 SEL1LQ9UBV2 794 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 TMEM131Q92545 1883 aa13.65□□□□□ -0.22
RNF40-208ENST00000565995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 TAF4O00268 1085 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 ADAM23O75077 832 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 KAT7O95251 611 aa13.64□□□□□ -0.23
RNF40-208ENST00000565995 KLF8O95600 359 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms