RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 FAM49BQ9NUQ9 324 aa20.15■□□□□ 0.82
CSPG4P13-201ENST00000565545 PARVAQ9NVD7 372 aa20.15■□□□□ 0.82
CSPG4P13-201ENST00000565545 MARCH5Q9NX47 278 aa20.15■□□□□ 0.82
CSPG4P13-201ENST00000565545 SF3B1O75533 1304 aaKnown RBP eCLIP20.15■□□□□ 0.82
CSPG4P13-201ENST00000565545 PTPRSQ13332 1948 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 COL4A4P53420 1690 aaPredicted RBP20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 GRID2IPA4D2P6 1211 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 GRXCR2A6NFK2 248 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 H3BQ06 376 aaPredicted RBP20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 HCRTO43612 131 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 PALMO75781 387 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 ALADP13716 330 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 RRM1P23921 792 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 BCAR1P56945 870 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 TSPY1Q01534 308 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 PDCLQ13371 301 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 ZNF268Q14587 947 aaPredicted RBP20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 INTS6LQ5JSJ4 861 aaKnown RBP20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM171BQ6P995 826 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 TTC30AQ86WT1 665 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 LRRC57Q8N9N7 239 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 UBA3Q8TBC4 463 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 SLC2A14Q8TDB8 520 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 SLC35F5Q8WV83 523 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 RTP3Q9BQQ7 232 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 CWH43Q9H720 699 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 OSGEPQ9NPF4 335 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 CRTAC1Q9NQ79 661 aa20.14■□□□□ 0.81
CSPG4P13-201ENST00000565545 COL4A6Q14031 1691 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 F8W810 466 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 H3BNC9 293 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 CCDC130P13994 396 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 FGFR3P22607 806 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 ACAT1P24752 427 aaKnown RBP20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 PSMC1P62191 440 aaKnown RBP20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 PTPN20Q4JDL3 420 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 MDH1BQ5I0G3 518 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 KIAA0319Q5VV43 1072 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 C11orf63Q6NUN7 778 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 FUT10Q6P4F1 479 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 FUKQ8N0W3 1084 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 C3orf20Q8ND61 904 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 HSFY1Q96LI6 401 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 SLC4A5Q9BY07 1137 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 DUSP16Q9BY84 665 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 SYNCQ9H7C4 482 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 CYTH4Q9UIA0 394 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM50BQ9Y247 325 aa20.13■□□□□ 0.81
CSPG4P13-201ENST00000565545 PRR33A8MZF0 331 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 FANCGO15287 622 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 ATP2C2O75185 946 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 PRLRP16471 622 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 LAG3P18627 525 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 ADORA2BP29275 332 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 ACADSBP45954 432 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 RPL34P49207 117 aaKnown RBP20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 PDE4CQ08493 712 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 MAMLD1Q13495 774 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 BTG3Q14201 252 aaPredicted RBP20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 TCEAL5Q5H9L2 206 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 PAPD7Q5XG87 772 aaKnown RBP20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 ZDHHC17Q8IUH5 632 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 CPXM1Q96SM3 734 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 MED10Q9BTT4 135 aa20.12■□□□□ 0.81
CSPG4P13-201ENST00000565545 TCRBV5S1A1TA0A578 114 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 H7C4K7 107 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 XPO1O14980 1071 aaKnown RBP20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 ATMINO43313 823 aaPredicted RBP20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 BUB1BO60566 1050 aaPredicted RBP20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 PLA2G4AP47712 749 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 MRPL58Q14197 206 aaKnown RBP20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 MEI1Q5TIA1 1274 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM171A1Q5VUB5 890 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 DNAJC24Q6P3W2 148 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 DAAM2Q86T65 1068 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 TMEM110Q86TL2 294 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 FEZF2Q8TBJ5 459 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 ZNF558Q96NG5 402 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 PKMYT1Q99640 499 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 LPIN3Q9BQK8 851 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 B3GNT5Q9BYG0 378 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 UBXN6Q9BZV1 441 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 NSUN3Q9H649 340 aaKnown RBP20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 ABCB6Q9NP58 842 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 AMFRQ9UKV5 643 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 VWA8A3KMH1 1905 aa20.11■□□□□ 0.81
CSPG4P13-201ENST00000565545 MYBPHLA2RUH7 354 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 OR6C75A6NL08 312 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 SIGLEC16A6NMB1 481 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 MYO1FO00160 1098 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 URI1O94763 535 aaPredicted RBP20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM200BP0CF97 657 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 NPR3P17342 541 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 VARS2Q5ST30 1063 aaKnown RBP20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 ZNF280DQ6N043 979 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 KCNT2Q6UVM3 1135 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 C4orf50Q6ZRC1 276 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 PAQR9Q6ZVX9 377 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms