RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CYFIP2Q96F07 1278 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 TMEM176AQ96HP8 235 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 KCNK16Q96T55 309 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 IL37Q9NZH6 218 aa16.37■□□□□ 0.21
COMMD4-212ENST00000565517 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 DPYSL4O14531 572 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 AP1G2O75843 785 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 PDGFBP01127 241 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 CCDC130P13994 396 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 NPR3P17342 541 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 AVPR1AP37288 418 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 RAD23BP54727 409 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 STARD6P59095 220 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 USP46P62068 366 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 PRKCQQ04759 706 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 FCHO2Q0JRZ9 810 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 ORC1Q13415 861 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 SLC44A4Q53GD3 710 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 TXNDC8Q6A555 127 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 PHLDB3Q6NSJ2 640 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 IRF2BP1Q8IU81 584 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 CELF5Q8N6W0 485 aaKnown RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 OVCA2Q8WZ82 227 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 SHDQ96IW2 340 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 CNOT6LQ96LI5 555 aaKnown RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 NT5C1BQ96P26 610 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 SMOQ99835 787 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 ARID3AQ99856 593 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 BRD9Q9H8M2 597 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 KRT82Q9NSB4 513 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 FAM49BQ9NUQ9 324 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 TRPM5Q9NZQ8 1165 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 CA14Q9ULX7 337 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 HELZP42694 1942 aaKnown RBP16.36■□□□□ 0.21
COMMD4-212ENST00000565517 ZDBF2Q9HCK1 2354 aa16.36■□□□□ 0.21
COMMD4-212ENST00000565517 TICRRQ7Z2Z1 1910 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 ZNF263O14978 683 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 CHADO15335 359 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 FAM200BP0CF97 657 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 YWHAQP27348 245 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 AVPR2P30518 371 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 PDE6CP51160 858 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 NUBP1P53384 320 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 GRM2Q14416 872 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 ZNF268Q14587 947 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-212ENST00000565517 ZNF394Q53GI3 561 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 ASTLQ6HA08 431 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-212ENST00000565517 FAM114A1Q8IWE2 563 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 ZMIZ2Q8NF64 920 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 RSPRY1Q96DX4 576 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 HEXIM2Q96MH2 286 aaKnown RBP16.35■□□□□ 0.21
COMMD4-212ENST00000565517 SLITRK1Q96PX8 696 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 KIF9Q9HAQ2 790 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 PNPLA8Q9NP80 782 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 HCN4Q9Y3Q4 1203 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 NCANO14594 1321 aa16.35■□□□□ 0.21
COMMD4-212ENST00000565517 COL4A2P08572 1712 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 FAM92AA1XBS5 289 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 ZNF840PA6NDX5 716 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 PRAMEF12O95522 483 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 USP17L7P0C7H9 530 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 GDI1P31150 447 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 MLLT6P55198 1093 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-212ENST00000565517 GCNT1Q02742 428 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 LRMPQ12912 555 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 TAF10Q12962 218 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 MLF2Q15773 248 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-212ENST00000565517 ARHGAP29Q52LW3 1261 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 ARHGAP17Q68EM7 881 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 CLEC20AQ6ZU45 233 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 YAF2Q8IY57 180 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 UBR7Q8N806 425 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 BPIFB1Q8TDL5 484 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 USP13Q92995 863 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-212ENST00000565517 LRRC3BQ96PB8 259 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 PRRX2Q99811 253 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 DDX23Q9BUQ8 820 aaKnown RBP16.34■□□□□ 0.21
COMMD4-212ENST00000565517 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 KIAA1257Q9ULG3 409 aa16.34■□□□□ 0.21
COMMD4-212ENST00000565517 MIA3Q5JRA6 1907 aa16.33■□□□□ 0.21
COMMD4-212ENST00000565517 TRAV19A0A0A6YYK7 116 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 GTPBP10A4D1E9 387 aaKnown RBP16.33■□□□□ 0.2
COMMD4-212ENST00000565517 ARNTLO00327 626 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 BEST1O76090 585 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-212ENST00000565517 GLULP15104 373 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 AOC1P19801 751 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 ADORA2BP29275 332 aa16.33■□□□□ 0.2
COMMD4-212ENST00000565517 SLC5A3P53794 718 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms