RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 KIF5AQ12840 1032 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 PPFIA1Q13136 1202 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MTMR3Q13615 1198 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 RAB33AQ14088 237 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 DSC3Q14574 896 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MTERF2Q49AM1 385 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 RRAGBQ5VZM2 374 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 SLC6A19Q695T7 634 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 NCAPH2Q6IBW4 605 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 CENPPQ6IPU0 288 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 ZAR1Q86SH2 424 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 GLYCTKQ8IVS8 523 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MFN1Q8IWA4 741 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 FAM9CQ8IZT9 166 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 UTP15Q8TED0 518 aaKnown RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 KCTD13Q8WZ19 329 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 CCDC106Q9BWC9 280 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 LMAN2LQ9H0V9 348 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 KAT14Q9H8E8 782 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MMRN2Q9H8L6 949 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 CRLF2Q9HC73 371 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 IL17RBQ9NRM6 502 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 TOPORSQ9NS56 1045 aaPredicted RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 SEPT11Q9NVA2 429 aaKnown RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MAD2L2Q9UI95 211 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MCM8Q9UJA3 840 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 FOXD3Q9UJU5 478 aaPredicted RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 PTBP2Q9UKA9 531 aaKnown RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 PHTF1Q9UMS5 762 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 PCDHA6Q9UN73 950 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 REXO2Q9Y3B8 237 aaKnown RBP5.45□□□□□ -1.54
CAPN3-214ENST00000565274 PCDHA8Q9Y5H6 950 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 KIAA1551Q9HCM1 1747 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 GRIN2DO15399 1336 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 FLT1P17948 1338 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 MYO3BQ8WXR4 1341 aa5.45□□□□□ -1.54
CAPN3-214ENST00000565274 A0A1B0GUL6 1792 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PLIN4Q96Q06 1357 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MYH14Q7Z406 1995 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TTC26A0AVF1 554 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CCDC169A6NNP5 214 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 A6NNZ2 444 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PI4K2BG5E9Z4 385 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CETN3O15182 167 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 EIF3HO15372 352 aaKnown RBP eCLIP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 NVLO15381 856 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ASAP2O43150 1006 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ZW10O43264 779 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 FRS3O43559 492 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PRDM1O75626 825 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ERLIN2O94905 339 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SLITRK3O94933 977 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 BAG3O95817 575 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TFRCP02786 760 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ATP1A1P05023 1023 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ITGB1P05556 798 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 C6orf222P0C671 652 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 EPB41P11171 864 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF3P17036 446 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TFEBP19484 476 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 DNAJB1P25685 340 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 COL5A3P25940 1745 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ANXA13P27216 316 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 GNA11P29992 359 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CYLC1P35663 651 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 STAT6P42226 847 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CCT5P48643 541 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 GUCY2FP51841 1108 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 STX17P56962 302 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 HERVK_113P62684 666 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TFAP4Q01664 338 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ATP2B2Q01814 1243 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 UBXN1Q04323 297 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 STK11Q15831 433 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CPSF6Q16630 551 aaKnown RBP eCLIP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SLC35G1Q2M3R5 365 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 C5orf22Q49AR2 442 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 KRTCAP3Q53RY4 240 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 RETSATQ6NUM9 610 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 WDR59Q6PJI9 974 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TPTE2Q6XPS3 522 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PIK3AP1Q6ZUJ8 805 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ANKS3Q6ZW76 656 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PLEKHM3Q6ZWE6 761 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CBLL1Q75N03 491 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 ENOSF1Q7L5Y1 443 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 DYMQ7RTS9 669 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 TMC7Q7Z402 723 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 NRAPQ86VF7 1730 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SPARTQ8N0X7 666 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 MMGT1Q8N4V1 131 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 PCSK9Q8NBP7 692 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SUPT20HQ8NEM7 779 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 FBXO30Q8TB52 745 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 AENQ8WTP8 325 aaKnown RBP5.44□□□□□ -1.54
CAPN3-214ENST00000565274 CPLX3Q8WVH0 158 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 POF1BQ8WVV4 589 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SHC3Q92529 594 aa5.44□□□□□ -1.54
CAPN3-214ENST00000565274 SYN2Q92777 582 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms