RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NFU1Q9UMS0 254 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PAEPP09466 180 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 ODC1P11926 461 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SEL1L2Q5TEA6 688 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 AADACL2Q6P093 401 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TMEM86AQ8N2M4 240 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 GBF1Q92538 1859 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 NLRC5Q86WI3 1866 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 TCRBV5S1A1TA0A578 114 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 M0QZQ0 153 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 CALB1P05937 261 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 ECHS1P30084 290 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 MAN1A1P33908 653 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 RAD23BP54727 409 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 TRADDQ15628 312 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 ZNF394Q53GI3 561 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 MREGQ8N565 214 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 WDTC1Q8N5D0 677 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 IFT81Q8WYA0 676 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 SAMD11Q96NU1 681 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 LHX5Q9H2C1 402 aa13.35□□□□□ -0.27
NSMCE1-208ENST00000565070 CYB561D2O14569 222 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 SYN3O14994 580 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 SPTLC1O15269 473 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PHF2O75151 1096 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 CILPO75339 1184 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 TYMPP19971 482 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 CHRNA3P32297 505 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 CYP1B1Q16678 543 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 ZDHHC14Q8IZN3 488 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 SLC39A11Q8N1S5 342 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PRELID2Q8N945 189 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PLEKHA4Q9H4M7 779 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 MARCH5Q9NX47 278 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 LCMT1Q9UIC8 334 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 MSRAQ9UJ68 235 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
NSMCE1-208ENST00000565070 A0A1W2PPC1 479 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 TTI1O43156 1089 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 MED7O43513 233 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 CYP11A1P05108 521 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 RABGGTBP53611 331 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 CDH8P55286 799 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 KRT17Q04695 432 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 INCA1Q0VD86 236 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 PPP1R15BQ5SWA1 713 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 FUT10Q6P4F1 479 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 CD300LGQ6UXG3 332 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 LIMS2Q7Z4I7 341 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 ADAT2Q7Z6V5 191 aaKnown RBP13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 FAM71BQ8TC56 605 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 HASPINQ8TF76 798 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 PCYOX1Q9UHG3 505 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 CEP83Q9Y592 693 aa13.33□□□□□ -0.27
NSMCE1-208ENST00000565070 LINC01553A4QN01 128 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 FAM187AA6NFU0 413 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 TMEM191CA6NGB0 347 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 AGPSO00116 658 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 FSCN2O14926 492 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 PSTPIP1O43586 416 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 SYF2O95926 243 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 ITGB1P05556 798 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 FAM153BP0C7A2 387 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 LHX1P48742 406 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 FAM193AP78312 1265 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 DR1Q01658 176 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 SIX1Q15475 284 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 SOWAHAQ2M3V2 549 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 FAM153CQ494X1 144 aa13.33□□□□□ -0.28
NSMCE1-208ENST00000565070 ADGRF2Q8IZF7 708 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms