RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DDX6P26196 483 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 NDST1P52848 882 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 NFIL3Q16649 462 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 ZCWPW2Q504Y3 356 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TCERG1LQ5VWI1 586 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 MON1AQ86VX9 555 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 RIN3Q8TB24 985 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TRMT2BQ96GJ1 504 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 SLC22A12Q96S37 553 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 NELL2Q99435 816 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TSG101Q99816 390 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 IMPG2Q9BZV3 1241 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 ELOVL4Q9GZR5 314 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 VRTNQ9H8Y1 702 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 LMAN1LQ9HAT1 526 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 GKN1Q9NS71 199 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 RBM12Q9NTZ6 932 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 FAM49BQ9NUQ9 324 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TDP1Q9NUW8 608 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TMEM30AQ9NV96 361 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 ATP8B3O60423 1300 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 MYO16Q9Y6X6 1858 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 ARNTLO00327 626 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 IKBKBO14920 756 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CETN3O15182 167 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 MAPK13O15264 365 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 ASS1P00966 412 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 FAM163BP0C2L3 166 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CD58P19256 250 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 BMP6P22004 513 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 ADORA2BP29275 332 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 PMS1P54277 932 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 NOP14P78316 857 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CSTF1Q05048 431 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 MORC3Q14149 939 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CAMK4Q16566 473 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 DCAF17Q5H9S7 520 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 KLHL10Q6JEL2 608 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CC2D1AQ6P1N0 951 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 TXNDC11Q6PKC3 985 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 TSSK4Q6SA08 328 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 FAM35AQ86V20 835 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 ADSSL1Q8N142 457 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 JAKMIP2Q96AA8 810 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 SPATA17Q96L03 361 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 MYRFLQ96LU7 910 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 OSBPL6Q9BZF3 934 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 CLSTN2Q9H4D0 955 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 EBF3Q9H4W6 596 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 OBP2AQ9NY56 170 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 TRPM5Q9NZQ8 1165 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 KIAA1468Q9P260 1216 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 WDR87Q6ZQQ6 2873 aa14.49□□□□□ -0.09
VPS9D1-204ENST00000565023 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 BIN1O00499 593 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 AP1G2O75843 785 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 USP17L7P0C7H9 530 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 SP9P0CG40 484 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 ARSAP15289 507 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 HDCP19113 662 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 NBL1P41271 181 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 ASPAP45381 313 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 PON2Q15165 354 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 EDRF1Q3B7T1 1238 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 ANKRD40Q6AI12 368 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 ASCL5Q7RTU5 278 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 CCDC150Q8NCX0 1101 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 GPT2Q8TD30 523 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 TAF4BQ92750 862 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 C8orf48Q96LL4 319 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 KCNK16Q96T55 309 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 C8orf33Q9H7E9 229 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 KIF9Q9HAQ2 790 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 APOBEC3GQ9HC16 384 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 TMEM8AQ9HCN3 771 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 TRPV5Q9NQA5 729 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 KRT82Q9NSB4 513 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 ZMYM5Q9UJ78 669 aa14.48□□□□□ -0.09
VPS9D1-204ENST00000565023 SCAMP3O14828 347 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 CD44P16070 742 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 WEE1P30291 646 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 CTHP32929 405 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 PPP1R2P41236 205 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 IFNAR2P48551 515 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 MXI1P50539 228 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 TAF10Q12962 218 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 MTAPQ13126 283 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 FZD5Q13467 585 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 MTF1Q14872 753 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 ITPRIPL2Q3MIP1 535 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 PAQR9Q6ZVX9 377 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 MAML2Q8IZL2 1156 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 C12orf29Q8N999 325 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 TRIML1Q8N9V2 468 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 SLC2A14Q8TDB8 520 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 NKD2Q969F2 451 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-204ENST00000565023 FBXO32Q969P5 355 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms