RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 PCDHA5Q9Y5H7 936 aa26.91■■□□□ 1.9
AC009041.3-201ENST00000564390 MTAPQ13126 283 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 ZNF658Q5TYW1 1059 aaPredicted RBP26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 TAF4BQ92750 862 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 NKD2Q969F2 451 aaPredicted RBP26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 SMARCE1Q969G3 411 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 GSDMAQ96QA5 445 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 MED10Q9BTT4 135 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 C8orf33Q9H7E9 229 aaPredicted RBP26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 LMAN1LQ9HAT1 526 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 APOBEC3GQ9HC16 384 aaKnown RBP26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 DMDP11532 3685 aa26.9■■□□□ 1.9
AC009041.3-201ENST00000564390 HELZP42694 1942 aaKnown RBP26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 SMC2O95347 1197 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 NDST1P52848 882 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 NOP14P78316 857 aaKnown RBP26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 WDR44Q5JSH3 913 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 MSANTD3Q96H12 275 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 TNIP3Q96KP6 325 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 TTLL2Q9BWV7 592 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 CHRDQ9H2X0 955 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 EBF3Q9H4W6 596 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 HPS4Q9NQG7 708 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 RBM12Q9NTZ6 932 aaKnown RBP26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 GCNT4Q9P109 453 aa26.89■■□□□ 1.9
AC009041.3-201ENST00000564390 ATP8B3O60423 1300 aa26.89■■□□□ 1.89
AC009041.3-201ENST00000564390 SOBPA7XYQ1 873 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 USP17L7P0C7H9 530 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 CCDC130P13994 396 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 ARSAP15289 507 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 MLLT6P55198 1093 aaPredicted RBP26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 CSTF1Q05048 431 aaKnown RBP26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 ZNF268Q14587 947 aaPredicted RBP26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 ITPRIPL2Q3MIP1 535 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 TSSK4Q6SA08 328 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 PAQR9Q6ZVX9 377 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 SPATA20Q8TB22 786 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 CEP295NLQ96MC4 621 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 KCNK16Q96T55 309 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 FAM83CQ9BQN1 747 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 IMPG2Q9BZV3 1241 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 TRPM5Q9NZQ8 1165 aa26.88■■□□□ 1.89
AC009041.3-201ENST00000564390 ZFHX2Q9C0A1 2572 aaPredicted RBP26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 GADD45BO75293 160 aaPredicted RBP26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 CHRNB1P11230 501 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 PMS1P54277 932 aaKnown RBP26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 USP4Q13107 963 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 MTF1Q14872 753 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 PON2Q15165 354 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 ZNF77Q15935 545 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 ISM2Q6H9L7 571 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 CC2D1AQ6P1N0 951 aaPredicted RBP26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 RALGPS2Q86X27 583 aaPredicted RBP26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 TIGD1Q96MW7 591 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 TMEM8AQ9HCN3 771 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 KRT82Q9NSB4 513 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 FAM49BQ9NUQ9 324 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 CACNA1IQ9P0X4 2223 aa26.87■■□□□ 1.89
AC009041.3-201ENST00000564390 F5P12259 2224 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 TRIM49BA6NDI0 452 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 OTOL1A6NHN0 477 aaPredicted RBP26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 CETN3O15182 167 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 ABL1P00519 1130 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 EPB41P11171 864 aaKnown RBP26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 TAF10Q12962 218 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 FUKQ8N0W3 1084 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 SH3RF2Q8TEC5 729 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 TWNKQ96RR1 684 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 TSG101Q99816 390 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 HOOK1Q9UJC3 728 aaKnown RBP26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 FBXO4Q9UKT5 387 aa26.86■■□□□ 1.89
AC009041.3-201ENST00000564390 HDCP19113 662 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 ENPEPQ07075 957 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 RUNX3Q13761 415 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 COBLL1Q53SF7 1204 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 ANKRD40Q6AI12 368 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 Q6ZS52 159 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 C12orf29Q8N999 325 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 SLC2A14Q8TDB8 520 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 SMARCD1Q96GM5 515 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 NIF3L1Q9GZT8 377 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 DMAP1Q9NPF5 467 aaPredicted RBP26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 PRMT8Q9NR22 394 aaPredicted RBP26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 EHD2Q9NZN4 543 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 WNT6Q9Y6F9 365 aa26.85■■□□□ 1.89
AC009041.3-201ENST00000564390 ZNF840PA6NDX5 716 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 KINO60870 393 aaKnown RBP26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 AP1G2O75843 785 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 CD58P19256 250 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 MXI1P50539 228 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 GAS6Q14393 721 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 DCAF17Q5H9S7 520 aaPredicted RBP26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 C1orf228Q6PIY5 440 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 ZC3H14Q6PJT7 736 aaKnown RBP26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 ADSSL1Q8N142 457 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 NUP93Q8N1F7 819 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 SCAMP5Q8TAC9 235 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 SEMA4DQ92854 862 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 MAN1B1Q9UKM7 699 aa26.84■■□□□ 1.89
AC009041.3-201ENST00000564390 FANCMQ8IYD8 2048 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms